RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 RSRC1Q96IZ7 334 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 SLC26A6Q9BXS9 759 aa12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 TAB2Q9NYJ8 693 aa12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 HYOU1Q9Y4L1 999 aa12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 PCDHB6Q9Y5E3 794 aa12.8□□□□□ -0.36
TNRC6A-205ENST00000464539 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 A0A087WZG4 1122 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 ZNF185O15231 689 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 DEXIO95424 95 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 PHKG2P15735 406 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 DNM2P50570 870 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 RCAN1P53805 252 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 ZNF658Q5TYW1 1059 aaPredicted RBP12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 LRIG3Q6UXM1 1119 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 NFXL1Q6ZNB6 911 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 ZNF507Q8TCN5 953 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 KCNG1Q9UIX4 513 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 TSKSQ9UJT2 592 aa12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
TNRC6A-205ENST00000464539 PRAMEF22A3QJZ6 481 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 EYA2O00167 538 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 DNAJC8O75937 253 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 MTA3Q9BTC8 594 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 NHEJ1Q9H9Q4 299 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 H7C1W4 665 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 MGRN1O60291 552 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 PAX7P23759 505 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 ZBED6P86452 979 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 FOXO4P98177 505 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 GUCY1A3Q02108 690 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 SPA17Q15506 151 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 FIGNQ5HY92 759 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CCDC181Q5TID7 509 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 HAUS3Q68CZ6 603 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CRELD2Q6UXH1 353 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CCHCR1Q8TD31 782 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 CYFIP2Q96F07 1278 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 LY9Q9HBG7 655 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 PCNTO95613 3336 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 TIAM2Q8IVF5 1701 aa12.78□□□□□ -0.36
TNRC6A-205ENST00000464539 A0A1W2PQJ5 194 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 KLHL33A6NCF5 533 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 C5orf60A6NFR6 353 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 ZNF233A6NK53 670 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 POTECB2RU33 542 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 GPAA1O43292 621 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 HDLBPQ00341 1268 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 ITGB3BPQ13352 177 aaPredicted RBP12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 ANKRD20A8PQ5CZ79 823 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 C8orf74Q6P047 294 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 USP49Q70CQ1 688 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 ABHD8Q96I13 439 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 CCDC43Q96MW1 224 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 ALS2CR12Q96Q35 445 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 OSBPL9Q96SU4 736 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 LACRTQ9GZZ8 138 aa12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 PDS5AQ29RF7 1337 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-205ENST00000464539 A0A087X0B3 334 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 ANKRD33BA6NCL7 494 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 E7EVH7 732 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 SRGNP10124 158 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 PPP2R5BQ15173 497 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 SH2D3CQ8N5H7 860 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 HOMER3Q9NSC5 361 aa12.76□□□□□ -0.37
TNRC6A-205ENST00000464539 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms