RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 MTMR8Q96EF0 704 aa24.2■■□□□ 1.46
CD58-204ENST00000464088 RIOX1Q9H6W3 641 aa24.2■■□□□ 1.46
CD58-204ENST00000464088 PDLIM7Q9NR12 457 aa24.2■■□□□ 1.46
CD58-204ENST00000464088 RIPK3Q9Y572 518 aa24.2■■□□□ 1.46
CD58-204ENST00000464088 MUC3AQ02505 3323 aa24.2■■□□□ 1.46
CD58-204ENST00000464088 NID2Q14112 1375 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 SEPT4O43236 478 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 ZBTB43O43298 467 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 CYTH3O43739 400 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 KIF5BP33176 963 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 TRIM60Q495X7 471 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 SNRNP48Q6IEG0 339 aaKnown RBP24.19■■□□□ 1.46
CD58-204ENST00000464088 SYNE3Q6ZMZ3 975 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 AGBL1Q96MI9 1066 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 MROH8Q9H579 483 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 JMJD4Q9H9V9 463 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 PRDM5Q9NQX1 630 aaPredicted RBP24.19■■□□□ 1.46
CD58-204ENST00000464088 CTDP1Q9Y5B0 961 aaPredicted RBP24.19■■□□□ 1.46
CD58-204ENST00000464088 TTC28Q96AY4 2481 aa24.19■■□□□ 1.46
CD58-204ENST00000464088 TRIM43BA6NCK2 446 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 ICAM1P05362 532 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 FOSL2P15408 326 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 COPB2P35606 906 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 CCDC174Q6PII3 467 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 CCDC144CPQ8IYA2 1237 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 TRIM43Q96BQ3 446 aaPredicted RBP24.18■■□□□ 1.46
CD58-204ENST00000464088 TBC1D32Q96NH3 1257 aa24.18■■□□□ 1.46
CD58-204ENST00000464088 UPF2Q9HAU5 1272 aaKnown RBP24.18■■□□□ 1.46
CD58-204ENST00000464088 FAM217BQ9NTX9 383 aaPredicted RBP24.18■■□□□ 1.46
CD58-204ENST00000464088 ZNFX1Q9P2E3 1918 aaKnown RBP24.18■■□□□ 1.46
CD58-204ENST00000464088 PLEKHA8P1O95397 391 aa24.17■■□□□ 1.46
CD58-204ENST00000464088 SMARCA1P28370 1054 aa24.17■■□□□ 1.46
CD58-204ENST00000464088 ADORA2AP29274 412 aa24.17■■□□□ 1.46
CD58-204ENST00000464088 CDC37Q16543 378 aaPredicted RBP24.17■■□□□ 1.46
CD58-204ENST00000464088 SH3RF1Q7Z6J0 888 aa24.17■■□□□ 1.46
CD58-204ENST00000464088 DPP9Q86TI2 863 aa24.17■■□□□ 1.46
CD58-204ENST00000464088 NCAPG2Q86XI2 1143 aa24.17■■□□□ 1.46
CD58-204ENST00000464088 GNAQP50148 359 aa24.16■■□□□ 1.46
CD58-204ENST00000464088 TMTC3Q6ZXV5 915 aa24.16■■□□□ 1.46
CD58-204ENST00000464088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.16■■□□□ 1.46
CD58-204ENST00000464088 SRBD1Q8N5C6 995 aaKnown RBP24.16■■□□□ 1.46
CD58-204ENST00000464088 LZTS2Q9BRK4 669 aa24.16■■□□□ 1.46
CD58-204ENST00000464088 SPZ1Q9BXG8 430 aa24.16■■□□□ 1.46
CD58-204ENST00000464088 VAT1LQ9HCJ6 419 aa24.16■■□□□ 1.46
CD58-204ENST00000464088 GOLGA8BA8MQT2 603 aa24.15■■□□□ 1.46
CD58-204ENST00000464088 TAL1P17542 331 aaPredicted RBP24.15■■□□□ 1.46
CD58-204ENST00000464088 PDIA3P30101 505 aaKnown RBP24.15■■□□□ 1.46
CD58-204ENST00000464088 RTN1Q16799 776 aa24.15■■□□□ 1.46
CD58-204ENST00000464088 QRICH1Q2TAL8 776 aa24.15■■□□□ 1.46
CD58-204ENST00000464088 TKFCQ3LXA3 575 aa24.15■■□□□ 1.46
CD58-204ENST00000464088 RBM28Q9NW13 759 aaKnown RBP24.15■■□□□ 1.46
CD58-204ENST00000464088 CCPG1Q9ULG6 757 aa24.15■■□□□ 1.46
CD58-204ENST00000464088 GOLGA8AA7E2F4 631 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 CDC27P30260 824 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 ADCYAP1R1P41586 468 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 NEK4P51957 841 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 AK2P54819 239 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 LRRC41Q15345 812 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 ANO1Q5XXA6 986 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 CHST13Q8NET6 341 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 LARP6Q9BRS8 491 aaKnown RBP24.14■■□□□ 1.45
CD58-204ENST00000464088 PNMA2Q9UL42 364 aa24.14■■□□□ 1.45
CD58-204ENST00000464088 DHX16O60231 1041 aaKnown RBP24.13■■□□□ 1.45
CD58-204ENST00000464088 COBLO75128 1261 aa24.13■■□□□ 1.45
CD58-204ENST00000464088 METAP2P50579 478 aaKnown RBP eCLIP24.13■■□□□ 1.45
CD58-204ENST00000464088 FUT2Q10981 343 aa24.13■■□□□ 1.45
CD58-204ENST00000464088 PPP2R5BQ15173 497 aa24.13■■□□□ 1.45
CD58-204ENST00000464088 ABRAQ8N0Z2 381 aa24.13■■□□□ 1.45
CD58-204ENST00000464088 CMTR1Q8N1G2 835 aaKnown RBP24.13■■□□□ 1.45
CD58-204ENST00000464088 ZNF274Q96GC6 653 aaPredicted RBP24.13■■□□□ 1.45
CD58-204ENST00000464088 PIGSQ96S52 555 aa24.13■■□□□ 1.45
CD58-204ENST00000464088 RNF146Q9NTX7 359 aa24.13■■□□□ 1.45
CD58-204ENST00000464088 NAP1L2Q9ULW6 460 aaPredicted RBP24.13■■□□□ 1.45
CD58-204ENST00000464088 ZBTB5O15062 677 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 PPP1R11O60927 126 aaPredicted RBP24.12■■□□□ 1.45
CD58-204ENST00000464088 ALAS1P13196 640 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 ITGB8P26012 769 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 SLC4A3P48751 1232 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 TLE2Q04725 743 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 TRERF1Q96PN7 1200 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 SLC5A4Q9NY91 659 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 FBXO40Q9UH90 709 aa24.12■■□□□ 1.45
CD58-204ENST00000464088 FCER1AP12319 257 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 ADD1P35611 737 aaKnown RBP24.11■■□□□ 1.45
CD58-204ENST00000464088 ANKRD1Q15327 319 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 MUM1L1Q5H9M0 696 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 FERMT2Q96AC1 680 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 RNPC3Q96LT9 517 aaKnown RBP24.11■■□□□ 1.45
CD58-204ENST00000464088 ACAD9Q9H845 621 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 HOMER2Q9NSB8 354 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 TPCN1Q9ULQ1 816 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 PHF24Q9UPV7 400 aa24.11■■□□□ 1.45
CD58-204ENST00000464088 CNTNAP5Q8WYK1 1306 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 PNMA6FA0A0J9YX94 578 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 EPHB4P54760 987 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 TJAP1Q5JTD0 557 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 PRAMEF19Q5SWL8 479 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 FBXO11Q86XK2 927 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 HOMER1Q86YM7 354 aa24.1■■□□□ 1.45
CD58-204ENST00000464088 CLEC4DQ8WXI8 215 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms