RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 PPP1R13LQ8WUF5 828 aa12.11□□□□□ -0.47
TMEM54-203ENST00000463914 ASB2Q96Q27 587 aa12.11□□□□□ -0.47
TMEM54-203ENST00000463914 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
TMEM54-203ENST00000463914 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
TMEM54-203ENST00000463914 SLC28A3Q9HAS3 691 aa12.11□□□□□ -0.47
TMEM54-203ENST00000463914 TRMT13Q9NUP7 481 aaKnown RBP12.11□□□□□ -0.47
TMEM54-203ENST00000463914 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
TMEM54-203ENST00000463914 PRRC2BQ5JSZ5 2229 aaKnown RBP12.1□□□□□ -0.47
TMEM54-203ENST00000463914 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 PTPRSQ13332 1948 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 NOVP48745 357 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 SYDE2Q5VT97 1194 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 DCAF4Q8WV16 495 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 ATXN2LQ8WWM7 1075 aaKnown RBP12.1□□□□□ -0.47
TMEM54-203ENST00000463914 Q9Y3F1 56 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 NCOR1O75376 2440 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 TNKSO95271 1327 aa12.1□□□□□ -0.47
TMEM54-203ENST00000463914 COL4A4P53420 1690 aaPredicted RBP12.1□□□□□ -0.47
TMEM54-203ENST00000463914 ORC4O43929 436 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
TMEM54-203ENST00000463914 DEFB128Q7Z7B8 93 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 OR6J1Q8NGC5 347 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
TMEM54-203ENST00000463914 WDR11Q9BZH6 1224 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
TMEM54-203ENST00000463914 PTPDC1A2A3K4 754 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 MYL3P08590 195 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
TMEM54-203ENST00000463914 COL9A1P20849 921 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 PURAQ00577 322 aaKnown RBP12.08□□□□□ -0.48
TMEM54-203ENST00000463914 FAM47CQ5HY64 1035 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 BTNL9Q6UXG8 535 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
TMEM54-203ENST00000463914 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 LAMA4Q16363 1823 aa12.08□□□□□ -0.48
TMEM54-203ENST00000463914 TRIP12Q14669 1992 aaPredicted RBP12.08□□□□□ -0.48
TMEM54-203ENST00000463914 SPTBN5Q9NRC6 3674 aaKnown RBP12.08□□□□□ -0.48
TMEM54-203ENST00000463914 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 RFXAPO00287 272 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 PDHBP11177 359 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
TMEM54-203ENST00000463914 CALML3P27482 149 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 MRPS5P82675 430 aaKnown RBP12.07□□□□□ -0.48
TMEM54-203ENST00000463914 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
TMEM54-203ENST00000463914 COPS5Q92905 334 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 FAM227BQ96M60 508 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 UHRF1Q96T88 793 aaPredicted RBP12.07□□□□□ -0.48
TMEM54-203ENST00000463914 SEZ6LQ9BYH1 1024 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 MYH6P13533 1939 aa12.07□□□□□ -0.48
TMEM54-203ENST00000463914 RBM47A0AV96 593 aaKnown RBP12.06□□□□□ -0.48
TMEM54-203ENST00000463914 EPOPA6NHQ4 379 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 CA3P07451 260 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 PFKMP08237 780 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 FGRP09769 529 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 CPT1AP50416 773 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 HAND2P61296 217 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 RPS6P62753 249 aaKnown RBP12.06□□□□□ -0.48
TMEM54-203ENST00000463914 TFF2Q03403 129 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 PDE4DQ08499 809 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 ALX1Q15699 326 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
TMEM54-203ENST00000463914 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
TMEM54-203ENST00000463914 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
TMEM54-203ENST00000463914 CHD9Q3L8U1 2897 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 CHD7Q9P2D1 2997 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 LOC102724159A0A0B4J2E5 919 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 ARIH2O95376 493 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 FGAP02671 866 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 SUPT20HL2P0C7V6 817 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 EDNRBP24530 442 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 KCNQ1P51787 676 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 ZNF543Q08ER8 600 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 PWP2Q15269 919 aaKnown RBP12.05□□□□□ -0.48
TMEM54-203ENST00000463914 KRT40Q6A162 431 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 RNF207Q6ZRF8 634 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 TBC1D10CQ8IV04 446 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
TMEM54-203ENST00000463914 KIAA1217Q5T5P2 1943 aa12.05□□□□□ -0.48
TMEM54-203ENST00000463914 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms