RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 ICAM1P05362 532 aa17.84■□□□□ 0.45
SREBF2-205ENST00000463741 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
SREBF2-205ENST00000463741 TRMT13Q9NUP7 481 aaKnown RBP17.84■□□□□ 0.45
SREBF2-205ENST00000463741 CHD7Q9P2D1 2997 aa17.84■□□□□ 0.45
SREBF2-205ENST00000463741 TNKSO95271 1327 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 FOXP2O15409 715 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 MYL3P08590 195 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 CYP2C9P11712 490 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 ATP2A2P16615 1042 aaKnown RBP17.83■□□□□ 0.44
SREBF2-205ENST00000463741 SLC16A2P36021 539 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.44
SREBF2-205ENST00000463741 BAATQ14032 418 aaPredicted RBP17.83■□□□□ 0.44
SREBF2-205ENST00000463741 DUSP28Q4G0W2 176 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 DEFB128Q7Z7B8 93 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.44
SREBF2-205ENST00000463741 RANBP17Q9H2T7 1088 aaKnown RBP17.83■□□□□ 0.44
SREBF2-205ENST00000463741 POLR3EQ9NVU0 708 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 ADD3Q9UEY8 706 aaKnown RBP17.83■□□□□ 0.44
SREBF2-205ENST00000463741 RAPGEFL1Q9UHV5 662 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 PCDHA11Q9Y5I1 949 aa17.83■□□□□ 0.44
SREBF2-205ENST00000463741 PTPDC1A2A3K4 754 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 NFIBO00712 420 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 CPT1AP50416 773 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 PURAQ00577 322 aaKnown RBP17.82■□□□□ 0.44
SREBF2-205ENST00000463741 TTLL4Q14679 1199 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 OR6J1Q8NGC5 347 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 MORC4Q8TE76 937 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 DCAF4Q8WV16 495 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 VWCEQ96DN2 955 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 WDR11Q9BZH6 1224 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 TOMM22Q9NS69 142 aa17.82■□□□□ 0.44
SREBF2-205ENST00000463741 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
SREBF2-205ENST00000463741 PFKMP08237 780 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 SUPT20HL2P0C7V6 817 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 SKIV2LQ15477 1246 aaKnown RBP17.81■□□□□ 0.44
SREBF2-205ENST00000463741 SYDE2Q5VT97 1194 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 TTBK2Q6IQ55 1244 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 SLC30A10Q6XR72 485 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 PPP1R13LQ8WUF5 828 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
SREBF2-205ENST00000463741 TANC1Q9C0D5 1861 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 SCN5AQ14524 2016 aa17.81■□□□□ 0.44
SREBF2-205ENST00000463741 CA3P07451 260 aa17.8■□□□□ 0.44
SREBF2-205ENST00000463741 MX1P20591 662 aa17.8■□□□□ 0.44
SREBF2-205ENST00000463741 CALML3P27482 149 aa17.8■□□□□ 0.44
SREBF2-205ENST00000463741 TFF2Q03403 129 aa17.8■□□□□ 0.44
SREBF2-205ENST00000463741 RRP12Q5JTH9 1297 aaKnown RBP17.8■□□□□ 0.44
SREBF2-205ENST00000463741 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
SREBF2-205ENST00000463741 NECAB3Q96P71 396 aaPredicted RBP17.8■□□□□ 0.44
SREBF2-205ENST00000463741 MTG1Q9BT17 334 aaPredicted RBP17.8■□□□□ 0.44
SREBF2-205ENST00000463741 CERS4Q9HA82 394 aa17.8■□□□□ 0.44
SREBF2-205ENST00000463741 XIRP2A4UGR9 3374 aa17.79■□□□□ 0.44
SREBF2-205ENST00000463741 RAD50Q92878 1312 aa17.79■□□□□ 0.44
SREBF2-205ENST00000463741 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
SREBF2-205ENST00000463741 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
SREBF2-205ENST00000463741 GPCPD1Q9NPB8 672 aa17.79■□□□□ 0.44
SREBF2-205ENST00000463741 BDP1A6H8Y1 2624 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 RFXAPO00287 272 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 ORC4O43929 436 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 ACTN1P12814 892 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 PDE4DQ08499 809 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 BRDTQ58F21 947 aaPredicted RBP17.78■□□□□ 0.44
SREBF2-205ENST00000463741 RNF207Q6ZRF8 634 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 ANAPC4Q9UJX5 808 aa17.78■□□□□ 0.44
SREBF2-205ENST00000463741 TCF20Q9UGU0 1960 aaKnown RBP17.77■□□□□ 0.44
SREBF2-205ENST00000463741 SCN10AQ9Y5Y9 1956 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 NCOR1O75376 2440 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 LOC102724159A0A0B4J2E5 919 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 RBM47A0AV96 593 aaKnown RBP17.77■□□□□ 0.44
SREBF2-205ENST00000463741 GTPBP6O43824 516 aaPredicted RBP17.77■□□□□ 0.44
SREBF2-205ENST00000463741 TOP1P11387 765 aaKnown RBP17.77■□□□□ 0.44
SREBF2-205ENST00000463741 NOVP48745 357 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 KCNQ1P51787 676 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 CHMP4BP1P59074 171 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 PWP2Q15269 919 aaKnown RBP17.77■□□□□ 0.44
SREBF2-205ENST00000463741 NBPF20Q3BBV1 942 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 SLC9A7Q96T83 725 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 MPHOSPH6Q99547 160 aaKnown RBP17.77■□□□□ 0.44
SREBF2-205ENST00000463741 TMEM47Q9BQJ4 181 aa17.77■□□□□ 0.44
SREBF2-205ENST00000463741 REV3LO60673 3130 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 RFC2P35250 354 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 RPS6P62753 249 aaKnown RBP17.76■□□□□ 0.43
SREBF2-205ENST00000463741 AAK1Q2M2I8 961 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 CLEC4DQ8WXI8 215 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 COPS5Q92905 334 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 FTOQ9C0B1 505 aaKnown RBP eCLIP17.76■□□□□ 0.43
SREBF2-205ENST00000463741 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
SREBF2-205ENST00000463741 EPOPA6NHQ4 379 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 NKRFO15226 690 aaKnown RBP eCLIP17.75■□□□□ 0.43
SREBF2-205ENST00000463741 PDHBP11177 359 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 KRT40Q6A162 431 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 RETREG2Q8NC44 543 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 ARNTL2Q8WYA1 636 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 PCDHB15Q9Y5E8 787 aa17.75■□□□□ 0.43
SREBF2-205ENST00000463741 MTCH2Q9Y6C9 303 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms