RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ANKRD45Q5TZF3 282 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 TICAM2Q86XR7 235 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 TMEM47Q9BQJ4 181 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 PNMA2Q9UL42 364 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 LRRC37A2A6NM11 1700 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 FGAP02671 866 aa23.31■■□□□ 1.32
VARS-221ENST00000463184 OTOP2Q7RTS6 562 aa23.31■■□□□ 1.32
VARS-221ENST00000463184 WDR11Q9BZH6 1224 aa23.31■■□□□ 1.32
VARS-221ENST00000463184 ALDH8A1Q9H2A2 487 aaPredicted RBP23.31■■□□□ 1.32
VARS-221ENST00000463184 POLR3EQ9NVU0 708 aa23.31■■□□□ 1.32
VARS-221ENST00000463184 PTPDC1A2A3K4 754 aa23.3■■□□□ 1.32
VARS-221ENST00000463184 SUPT20HL2P0C7V6 817 aa23.3■■□□□ 1.32
VARS-221ENST00000463184 MCMDC2Q4G0Z9 681 aa23.3■■□□□ 1.32
VARS-221ENST00000463184 RRP12Q5JTH9 1297 aaKnown RBP23.3■■□□□ 1.32
VARS-221ENST00000463184 WNT8AQ9H1J5 351 aa23.3■■□□□ 1.32
VARS-221ENST00000463184 SLC28A3Q9HAS3 691 aa23.3■■□□□ 1.32
VARS-221ENST00000463184 PRDM6Q9NQX0 595 aa23.3■■□□□ 1.32
VARS-221ENST00000463184 RBM47A0AV96 593 aaKnown RBP23.29■■□□□ 1.32
VARS-221ENST00000463184 NFIBO00712 420 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 CPT1AP50416 773 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 PDE1AP54750 535 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 MYO9BQ13459 2157 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 PPM1EQ8WY54 764 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 TTC14Q96N46 770 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 NKX2-4Q9H2Z4 354 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 GPCPD1Q9NPB8 672 aa23.29■■□□□ 1.32
VARS-221ENST00000463184 FRMPD2Q68DX3 1309 aaPredicted RBP23.29■■□□□ 1.32
VARS-221ENST00000463184 LCTP09848 1927 aa23.28■■□□□ 1.32
VARS-221ENST00000463184 ATXN2LQ8WWM7 1075 aaKnown RBP23.28■■□□□ 1.32
VARS-221ENST00000463184 FAM227BQ96M60 508 aa23.28■■□□□ 1.32
VARS-221ENST00000463184 MPHOSPH6Q99547 160 aaKnown RBP23.28■■□□□ 1.32
VARS-221ENST00000463184 SLC4A7Q9Y6M7 1214 aa23.28■■□□□ 1.32
VARS-221ENST00000463184 ZMYM6O95789 1325 aa23.28■■□□□ 1.32
VARS-221ENST00000463184 NKRFO15226 690 aaKnown RBP eCLIP23.27■■□□□ 1.32
VARS-221ENST00000463184 HSPD1P10809 573 aaKnown RBP23.27■■□□□ 1.32
VARS-221ENST00000463184 PDHBP11177 359 aa23.27■■□□□ 1.32
VARS-221ENST00000463184 PCP11498 1178 aaKnown RBP23.27■■□□□ 1.32
VARS-221ENST00000463184 PURAQ00577 322 aaKnown RBP23.27■■□□□ 1.32
VARS-221ENST00000463184 BRDTQ58F21 947 aaPredicted RBP23.27■■□□□ 1.32
VARS-221ENST00000463184 RNF207Q6ZRF8 634 aa23.27■■□□□ 1.32
VARS-221ENST00000463184 CLEC4DQ8WXI8 215 aa23.27■■□□□ 1.32
VARS-221ENST00000463184 GPHNQ9NQX3 736 aaPredicted RBP23.27■■□□□ 1.32
VARS-221ENST00000463184 YBX2Q9Y2T7 364 aaKnown RBP23.27■■□□□ 1.32
VARS-221ENST00000463184 A0A0D9SFI3 127 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 PFKMP08237 780 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 MYL3P08590 195 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 CALML3P27482 149 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 ADGRE1Q14246 886 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 SCLYQ96I15 445 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 CRBNQ96SW2 442 aa23.26■■□□□ 1.31
VARS-221ENST00000463184 MTG1Q9BT17 334 aaPredicted RBP23.26■■□□□ 1.31
VARS-221ENST00000463184 TRMT13Q9NUP7 481 aaKnown RBP23.26■■□□□ 1.31
VARS-221ENST00000463184 CHD9Q3L8U1 2897 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 IGFBP4P22692 258 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 PDE4DQ08499 809 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 ZNF543Q08ER8 600 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 SLC30A10Q6XR72 485 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 MFSD6Q6ZSS7 791 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 DNERQ8NFT8 737 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 OR6J1Q8NGC5 347 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 THEGQ9P2T0 379 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 PCDHA11Q9Y5I1 949 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 TNKSO95271 1327 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 RAD50Q92878 1312 aa23.25■■□□□ 1.31
VARS-221ENST00000463184 B4DLN1 442 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 TNFRSF10AO00220 468 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 KPNA6O60684 536 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 SNHG28P0DPA3 235 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 MRPL12P52815 198 aaKnown RBP23.24■■□□□ 1.31
VARS-221ENST00000463184 RPS6P62753 249 aaKnown RBP23.24■■□□□ 1.31
VARS-221ENST00000463184 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 SCFD2Q8WU76 684 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 VWCEQ96DN2 955 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 TTC28Q96AY4 2481 aa23.24■■□□□ 1.31
VARS-221ENST00000463184 ZBBXA8MT70 800 aa23.23■■□□□ 1.31
VARS-221ENST00000463184 CYP2C9P11712 490 aa23.23■■□□□ 1.31
VARS-221ENST00000463184 EDNRBP24530 442 aa23.23■■□□□ 1.31
VARS-221ENST00000463184 RABGGTBP53611 331 aa23.23■■□□□ 1.31
VARS-221ENST00000463184 HAND2P61296 217 aa23.23■■□□□ 1.31
VARS-221ENST00000463184 HDAC1Q13547 482 aaPredicted RBP23.23■■□□□ 1.31
VARS-221ENST00000463184 ZNF589Q86UQ0 364 aaPredicted RBP23.23■■□□□ 1.31
VARS-221ENST00000463184 ASB2Q96Q27 587 aa23.23■■□□□ 1.31
VARS-221ENST00000463184 CENPBP07199 599 aaPredicted RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 ATP2A2P16615 1042 aaKnown RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 MRPS5P82675 430 aaKnown RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 NMIQ13287 307 aaPredicted RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 CCDC85BQ15834 202 aaPredicted RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 NBPF20Q3BBV1 942 aa23.22■■□□□ 1.31
VARS-221ENST00000463184 GPATCH4Q5T3I0 446 aaKnown RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 PPP2R2DQ66LE6 453 aa23.22■■□□□ 1.31
VARS-221ENST00000463184 NFRKBQ6P4R8 1299 aa23.22■■□□□ 1.31
VARS-221ENST00000463184 RGS22Q8NE09 1264 aa23.22■■□□□ 1.31
VARS-221ENST00000463184 RNF41Q9H4P4 317 aaPredicted RBP23.22■■□□□ 1.31
VARS-221ENST00000463184 CCDC171Q6TFL3 1326 aa23.22■■□□□ 1.31
VARS-221ENST00000463184 A6NJR5 290 aa23.21■■□□□ 1.31
VARS-221ENST00000463184 RFC2P35250 354 aa23.21■■□□□ 1.31
VARS-221ENST00000463184 PTPN11Q06124 597 aaPredicted RBP23.21■■□□□ 1.31
VARS-221ENST00000463184 TTLL4Q14679 1199 aa23.21■■□□□ 1.31
VARS-221ENST00000463184 FAM47CQ5HY64 1035 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms