RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 MCM3APO60318 1980 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 NFIBO00712 420 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 NEFLP07196 543 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 CPT1AP50416 773 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 RABGGTBP53611 331 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 SKIV2LQ15477 1246 aaKnown RBP15.36■□□□□ 0.05
COL4A2-204ENST00000463084 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 PPP2R2DQ66LE6 453 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 TAPT1Q6NXT6 567 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 RANBP17Q9H2T7 1088 aaKnown RBP15.36■□□□□ 0.05
COL4A2-204ENST00000463084 THEGQ9P2T0 379 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 NOD1Q9Y239 953 aa15.36■□□□□ 0.05
COL4A2-204ENST00000463084 ORC4O43929 436 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 SUPT20HL2P0C7V6 817 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 CYP2C9P11712 490 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 PPP2R5BQ15173 497 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 DUSP28Q4G0W2 176 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 RASIP1Q5U651 963 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 SLC30A10Q6XR72 485 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 RNF207Q6ZRF8 634 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 SLC43A3Q8NBI5 491 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 RILPL2Q969X0 211 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 TMEM47Q9BQJ4 181 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 ALDH8A1Q9H2A2 487 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-204ENST00000463084 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
COL4A2-204ENST00000463084 HELLSQ9NRZ9 838 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 TRMT13Q9NUP7 481 aaKnown RBP15.35■□□□□ 0.05
COL4A2-204ENST00000463084 Q9Y3F1 56 aa15.35■□□□□ 0.05
COL4A2-204ENST00000463084 ATP2A2P16615 1042 aaKnown RBP15.34■□□□□ 0.05
COL4A2-204ENST00000463084 NKX3-2P78367 333 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 USH1GQ495M9 461 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 MCMDC2Q4G0Z9 681 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 PPP1R13LQ8WUF5 828 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 FAM227BQ96M60 508 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 MTG1Q9BT17 334 aaPredicted RBP15.34■□□□□ 0.05
COL4A2-204ENST00000463084 FTOQ9C0B1 505 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL4A2-204ENST00000463084 WNT8AQ9H1J5 351 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 ANAPC4Q9UJX5 808 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 YBX2Q9Y2T7 364 aaKnown RBP15.34■□□□□ 0.05
COL4A2-204ENST00000463084 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
COL4A2-204ENST00000463084 GRIN2DO15399 1336 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 TNKSO95271 1327 aa15.34■□□□□ 0.05
COL4A2-204ENST00000463084 A0A0D9SFI3 127 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 B4DLN1 442 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 TNFRSF10AO00220 468 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 FOXP2O15409 715 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 DHX16O60231 1041 aaKnown RBP15.33■□□□□ 0.04
COL4A2-204ENST00000463084 FGAP02671 866 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 ACTN1P12814 892 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 MRPL12P52815 198 aaKnown RBP15.33■□□□□ 0.04
COL4A2-204ENST00000463084 AKNAD1Q5T1N1 836 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 RETREG2Q8NC44 543 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 PNMA2Q9UL42 364 aa15.33■□□□□ 0.04
COL4A2-204ENST00000463084 UNC80Q8N2C7 3258 aa15.32■□□□□ 0.04
COL4A2-204ENST00000463084 MYOGP15173 224 aa15.32■□□□□ 0.04
COL4A2-204ENST00000463084 PDE1AP54750 535 aa15.32■□□□□ 0.04
COL4A2-204ENST00000463084 MRPS5P82675 430 aaKnown RBP15.32■□□□□ 0.04
COL4A2-204ENST00000463084 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
COL4A2-204ENST00000463084 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
COL4A2-204ENST00000463084 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
COL4A2-204ENST00000463084 ATXN2LQ8WWM7 1075 aaKnown RBP15.32■□□□□ 0.04
COL4A2-204ENST00000463084 ZKSCAN3Q9BRR0 538 aa15.32■□□□□ 0.04
COL4A2-204ENST00000463084 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 TXNP10599 105 aaKnown RBP15.31■□□□□ 0.04
COL4A2-204ENST00000463084 PDHBP11177 359 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 RRP1P56182 461 aaKnown RBP15.31■□□□□ 0.04
COL4A2-204ENST00000463084 RPS6P62753 249 aaKnown RBP15.31■□□□□ 0.04
COL4A2-204ENST00000463084 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 ALX1Q15699 326 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 NBPF20Q3BBV1 942 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 TMEM67Q5HYA8 995 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 BTNL9Q6UXG8 535 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 ADAMTS19Q8TE59 1207 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 MORC4Q8TE76 937 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 SCFD2Q8WU76 684 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 COPS5Q92905 334 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 CRBNQ96SW2 442 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
COL4A2-204ENST00000463084 CERS4Q9HA82 394 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 PCDHA11Q9Y5I1 949 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
COL4A2-204ENST00000463084 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
COL4A2-204ENST00000463084 LRRC37A2A6NM11 1700 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 NKRFO15226 690 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL4A2-204ENST00000463084 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
COL4A2-204ENST00000463084 PFKMP08237 780 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 HSPD1P10809 573 aaKnown RBP15.3■□□□□ 0.04
COL4A2-204ENST00000463084 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
COL4A2-204ENST00000463084 ZNF543Q08ER8 600 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 CHST3Q7LGC8 479 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
COL4A2-204ENST00000463084 ESR2Q92731 530 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 ASB2Q96Q27 587 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 UHRF1Q96T88 793 aaPredicted RBP15.3■□□□□ 0.04
COL4A2-204ENST00000463084 LNPKQ9C0E8 428 aa15.3■□□□□ 0.04
COL4A2-204ENST00000463084 LOC102724159A0A0B4J2E5 919 aa15.29■□□□□ 0.04
COL4A2-204ENST00000463084 CA3P07451 260 aa15.29■□□□□ 0.04
COL4A2-204ENST00000463084 PWP2Q15269 919 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms