RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TBC1D5Q92609 795 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 LZTS2Q9BRK4 669 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 PCDHA1Q9Y5I3 950 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 OPLAHO14841 1288 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 ADCY6O43306 1168 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 ADAMTS4O75173 837 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 DUSP11O75319 330 aaKnown RBP21.85■■□□□ 1.09
COL9A3-203ENST00000462700 PLEKHA8P1O95397 391 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 PGK1P00558 417 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 MYCNP04198 464 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-203ENST00000462700 CPA1P15085 419 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 SMARCA1P28370 1054 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 TRAF1Q13077 416 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 SYNE3Q6ZMZ3 975 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 MICU3Q86XE3 530 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 FBXO16Q8IX29 292 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-203ENST00000462700 USP26Q9BXU7 913 aa21.85■■□□□ 1.09
COL9A3-203ENST00000462700 SENP6Q9GZR1 1112 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-203ENST00000462700 SYNRGQ9UMZ2 1314 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 EVI5O60447 810 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 EDNRBP24530 442 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 BLOC1S2Q6QNY1 142 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 EEPD1Q7L9B9 569 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 RNF180Q86T96 592 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 SRBD1Q8N5C6 995 aaKnown RBP21.84■■□□□ 1.09
COL9A3-203ENST00000462700 FANCBQ8NB91 859 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 SYTL5Q8TDW5 730 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-203ENST00000462700 VTA1Q9NP79 307 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 COL20A1Q9P218 1284 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 BRPF3Q9ULD4 1205 aa21.84■■□□□ 1.09
COL9A3-203ENST00000462700 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-203ENST00000462700 CFBP00751 764 aa21.83■■□□□ 1.09
COL9A3-203ENST00000462700 ADCYAP1R1P41586 468 aa21.83■■□□□ 1.09
COL9A3-203ENST00000462700 GHRHRQ02643 423 aa21.83■■□□□ 1.09
COL9A3-203ENST00000462700 TAPT1Q6NXT6 567 aa21.83■■□□□ 1.09
COL9A3-203ENST00000462700 PIBF1Q8WXW3 757 aa21.83■■□□□ 1.09
COL9A3-203ENST00000462700 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.09
COL9A3-203ENST00000462700 MPHOSPH6Q99547 160 aaKnown RBP21.83■■□□□ 1.09
COL9A3-203ENST00000462700 H0YGN5 161 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 RPS6KB1P23443 525 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 PSMA5P28066 241 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 HSD17B4P51659 736 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 TNFAIP2Q03169 654 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 LRRC26Q2I0M4 334 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 TMTC3Q6ZXV5 915 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 CMTR1Q8N1G2 835 aaKnown RBP21.82■■□□□ 1.08
COL9A3-203ENST00000462700 TAAR1Q96RJ0 339 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 PDGFCQ9NRA1 345 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 NR2E3Q9Y5X4 410 aa21.82■■□□□ 1.08
COL9A3-203ENST00000462700 PDE4DIPQ5VU43 2346 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 MCM3APO60318 1980 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 KLF18A0A0U1RQI7 1052 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 ZBTB43O43298 467 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 CASTP20810 708 aaKnown RBP21.81■■□□□ 1.08
COL9A3-203ENST00000462700 FGD1P98174 961 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 PDE4DQ08499 809 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 Q6ZUG5 572 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 SAMD3Q8N6K7 520 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 KLHDC9Q8NEP7 349 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 UPF3AQ9H1J1 476 aaKnown RBP21.81■■□□□ 1.08
COL9A3-203ENST00000462700 RBM28Q9NW13 759 aaKnown RBP21.81■■□□□ 1.08
COL9A3-203ENST00000462700 MAP3K20Q9NYL2 800 aaKnown RBP21.81■■□□□ 1.08
COL9A3-203ENST00000462700 SEC63Q9UGP8 760 aaKnown RBP21.81■■□□□ 1.08
COL9A3-203ENST00000462700 PHF24Q9UPV7 400 aa21.81■■□□□ 1.08
COL9A3-203ENST00000462700 MYADML2A6NDP7 307 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 B4DLN1 442 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 SMPD1P17405 629 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 MRPL12P52815 198 aaKnown RBP21.8■■□□□ 1.08
COL9A3-203ENST00000462700 GJA9P57773 515 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 IQSEC1Q6DN90 963 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 C7orf61Q8IZ16 206 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 NSUN6Q8TEA1 469 aaKnown RBP21.8■■□□□ 1.08
COL9A3-203ENST00000462700 RMDN3Q96TC7 470 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 GNEQ9Y223 722 aaKnown RBP21.8■■□□□ 1.08
COL9A3-203ENST00000462700 MYH6P13533 1939 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 ALPK3Q96L96 1907 aa21.8■■□□□ 1.08
COL9A3-203ENST00000462700 C6orf222P0C671 652 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 CST5P28325 142 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 RCAN1P53805 252 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 ATN1P54259 1190 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 IRX5P78411 483 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 RTN1Q16799 776 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 CCSAPQ6IQ19 270 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 NOL8Q76FK4 1167 aaKnown RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 FBXL16Q8N461 479 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 CCDC82Q8N4S0 544 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 BRF1Q92994 677 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 TSEN34Q9BSV6 310 aaKnown RBP21.79■■□□□ 1.08
COL9A3-203ENST00000462700 AGXT2Q9BYV1 514 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 SPC25Q9HBM1 224 aa21.79■■□□□ 1.08
COL9A3-203ENST00000462700 RBM47A0AV96 593 aaKnown RBP21.78■■□□□ 1.08
COL9A3-203ENST00000462700 GOLGA8AA7E2F4 631 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 GOLGA8BA8MQT2 603 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 GCOM1H8Y6P7 765 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-203ENST00000462700 POLR2MP0CAP2 368 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 HOXA13P31271 388 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-203ENST00000462700 NKX3-2P78367 333 aa21.78■■□□□ 1.08
COL9A3-203ENST00000462700 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms