RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 MRE11P49959 708 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 PDILTQ8N807 584 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 CRYGNQ8WXF5 182 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 ATG4CQ96DT6 458 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 TIGD1Q96MW7 591 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 SDF4Q9BRK5 362 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 TRAF5O00463 557 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 CTAGE5O15320 804 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 POLR2DO15514 142 aaKnown RBP17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 OR52Z1P0C646 297 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 TYRO3Q06418 890 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 AP3B2Q13367 1082 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 RNF214Q8ND24 703 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 CCPG1Q9ULG6 757 aa17.03■□□□□ 0.32
RPRD1B-203ENST00000462548 ABCB11O95342 1321 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 PIK3CDO00329 1044 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 FOXN1O15353 648 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 CDC25AP30304 524 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 NF2P35240 595 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 KRBA2Q6ZNG9 492 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 MTMR9Q96QG7 549 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 RRAGCQ9HB90 399 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 LAD1O00515 517 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 CFBP00751 764 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 PRPHP41219 470 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 ORC2Q13416 577 aaPredicted RBP17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 L1TD1Q5T7N2 865 aaKnown RBP17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 DTHD1Q6ZMT9 781 aa17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 MRPL11Q9Y3B7 192 aaKnown RBP17.02■□□□□ 0.32
RPRD1B-203ENST00000462548 VWA5AO00534 786 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 TRAF1Q13077 416 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 CLEC4DQ8WXI8 215 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 TMOD4Q9NZQ9 345 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 COL11A1P12107 1806 aaPredicted RBP17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 LONP1P36776 959 aaKnown RBP17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 FCHSD1Q86WN1 690 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 REPS2Q8NFH8 660 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
RPRD1B-203ENST00000462548 NFIBO00712 420 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 IRF6O14896 467 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 DSG3P32926 999 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 ARHGAP4P98171 946 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 TREML2Q5T2D2 321 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 GJA10Q969M2 543 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 DHX58Q96C10 678 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 SPDYE3A6NKU9 549 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 GCOM1H8Y6P7 765 aaPredicted RBP17■□□□□ 0.31
RPRD1B-203ENST00000462548 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
RPRD1B-203ENST00000462548 POLR2MP0CAP2 368 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 SREBF1P36956 1147 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 PNOCQ13519 176 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 CALCRLQ16602 461 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 GRAMD1CQ8IYS0 662 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 CNNM3Q8NE01 707 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
RPRD1B-203ENST00000462548 KIAA1468Q9P260 1216 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
RPRD1B-203ENST00000462548 ADAMTS5Q9UNA0 930 aa17■□□□□ 0.31
RPRD1B-203ENST00000462548 SPDYE5A6NIY4 337 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 ALAS1P13196 640 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 USP11P51784 963 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 PPATQ06203 517 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 HAS1Q92839 578 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 MBOAT7Q96N66 472 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 UIMC1Q96RL1 719 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 ZBED4O75132 1171 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 TXKP42681 527 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 E2F4Q16254 413 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 SASS6Q6UVJ0 657 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 ERO1BQ86YB8 467 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 HOMER2Q9NSB8 354 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 RIPK3Q9Y572 518 aa16.99■□□□□ 0.31
RPRD1B-203ENST00000462548 CYP3A7-CYP3A51PA0A087WV96 503 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 CYP3A7P24462 503 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 TECP42680 631 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 COG2Q14746 738 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 ANO6Q4KMQ2 910 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 LDLRAD1Q5T700 205 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 POTEEQ6S8J3 1075 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 ZMYND15Q9H091 742 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 ZNF408Q9H9D4 720 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 COL20A1Q9P218 1284 aa16.98■□□□□ 0.31
RPRD1B-203ENST00000462548 LOC285556D6RIA3 1793 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms