RNA–Protein interactions for RNA: ENST00000462357.1

IMP4-209, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-209ENST00000462357 PRAMEF19Q5SWL8 479 aa23.78■■□□□ 1.4
IMP4-209ENST00000462357 TMTC3Q6ZXV5 915 aa23.78■■□□□ 1.4
IMP4-209ENST00000462357 NSUN6Q8TEA1 469 aaKnown RBP23.78■■□□□ 1.4
IMP4-209ENST00000462357 SOWAHBA6NEL2 793 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 GCOM1H8Y6P7 765 aaPredicted RBP23.77■■□□□ 1.4
IMP4-209ENST00000462357 CYTH3O43739 400 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 SNAI1O95863 264 aaPredicted RBP23.77■■□□□ 1.4
IMP4-209ENST00000462357 POLR2MP0CAP2 368 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 AKAP17AQ02040 695 aaKnown RBP23.77■■□□□ 1.4
IMP4-209ENST00000462357 PDE4DQ08499 809 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 LHX8Q68G74 356 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 CPLX2Q6PUV4 134 aaKnown RBP23.77■■□□□ 1.4
IMP4-209ENST00000462357 SRBD1Q8N5C6 995 aaKnown RBP23.77■■□□□ 1.4
IMP4-209ENST00000462357 PIBF1Q8WXW3 757 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 IWS1Q96ST2 819 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 AGXT2Q9BYV1 514 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 BRPF3Q9ULD4 1205 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 CENPFP49454 3210 aa23.77■■□□□ 1.4
IMP4-209ENST00000462357 CPA1P15085 419 aa23.76■■□□□ 1.39
IMP4-209ENST00000462357 ALDH5A1P51649 535 aaPredicted RBP23.76■■□□□ 1.39
IMP4-209ENST00000462357 APOBRQ0VD83 1088 aa23.76■■□□□ 1.39
IMP4-209ENST00000462357 RNF180Q86T96 592 aa23.76■■□□□ 1.39
IMP4-209ENST00000462357 TEX2Q8IWB9 1127 aa23.76■■□□□ 1.39
IMP4-209ENST00000462357 CCDC82Q8N4S0 544 aa23.76■■□□□ 1.39
IMP4-209ENST00000462357 VTA1Q9NP79 307 aa23.76■■□□□ 1.39
IMP4-209ENST00000462357 KBTBD13C9JR72 458 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 hCG_1984214I3L0E3 225 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 PLEKHA8P1O95397 391 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 ZNF865P0CJ78 1059 aaPredicted RBP23.75■■□□□ 1.39
IMP4-209ENST00000462357 ARHGEF16Q5VV41 709 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 IQSEC1Q6DN90 963 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 SLC30A10Q6XR72 485 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 NOL8Q76FK4 1167 aaKnown RBP23.75■■□□□ 1.39
IMP4-209ENST00000462357 ZNF713Q8N859 430 aaPredicted RBP23.75■■□□□ 1.39
IMP4-209ENST00000462357 TRPV1Q8NER1 839 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 RMDN3Q96TC7 470 aa23.75■■□□□ 1.39
IMP4-209ENST00000462357 RAB11FIP4Q86YS3 637 aa23.74■■□□□ 1.39
IMP4-209ENST00000462357 SYTL5Q8TDW5 730 aaPredicted RBP23.74■■□□□ 1.39
IMP4-209ENST00000462357 MORC4Q8TE76 937 aa23.74■■□□□ 1.39
IMP4-209ENST00000462357 SHISA4Q96DD7 197 aa23.74■■□□□ 1.39
IMP4-209ENST00000462357 ZNF274Q96GC6 653 aaPredicted RBP23.74■■□□□ 1.39
IMP4-209ENST00000462357 GLT8D2Q9H1C3 349 aa23.74■■□□□ 1.39
IMP4-209ENST00000462357 XPNPEP3Q9NQH7 507 aa23.74■■□□□ 1.39
IMP4-209ENST00000462357 ZNFX1Q9P2E3 1918 aaKnown RBP23.73■■□□□ 1.39
IMP4-209ENST00000462357 DNM1LO00429 736 aa23.73■■□□□ 1.39
IMP4-209ENST00000462357 DUSP11O75319 330 aaKnown RBP23.73■■□□□ 1.39
IMP4-209ENST00000462357 HSD17B4P51659 736 aa23.73■■□□□ 1.39
IMP4-209ENST00000462357 EVCP57679 992 aa23.73■■□□□ 1.39
IMP4-209ENST00000462357 COL9A3Q14050 684 aaPredicted RBP23.73■■□□□ 1.39
IMP4-209ENST00000462357 UPF3BQ9BZI7 483 aaKnown RBP23.73■■□□□ 1.39
IMP4-209ENST00000462357 C11orf49Q9H6J7 331 aa23.73■■□□□ 1.39
IMP4-209ENST00000462357 CPLX1O14810 134 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 MYCNP04198 464 aaPredicted RBP23.72■■□□□ 1.39
IMP4-209ENST00000462357 TAL1P17542 331 aaPredicted RBP23.72■■□□□ 1.39
IMP4-209ENST00000462357 GHRHRQ02643 423 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 TNFAIP2Q03169 654 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 STXBP2Q15833 593 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 CCDC144BQ3MJ40 725 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 CMTR1Q8N1G2 835 aaKnown RBP23.72■■□□□ 1.39
IMP4-209ENST00000462357 SMARCC2Q8TAQ2 1214 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 PAWRQ96IZ0 340 aaKnown RBP23.72■■□□□ 1.39
IMP4-209ENST00000462357 FGD4Q96M96 766 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 ALDH8A1Q9H2A2 487 aaPredicted RBP23.72■■□□□ 1.39
IMP4-209ENST00000462357 PSTPIP2Q9H939 334 aa23.72■■□□□ 1.39
IMP4-209ENST00000462357 V9GY48 417 aaPredicted RBP23.72■■□□□ 1.39
IMP4-209ENST00000462357 PPP1R11O60927 126 aaPredicted RBP23.71■■□□□ 1.39
IMP4-209ENST00000462357 HEATR3Q7Z4Q2 680 aa23.71■■□□□ 1.39
IMP4-209ENST00000462357 TRIM22Q8IYM9 498 aa23.71■■□□□ 1.39
IMP4-209ENST00000462357 IL27Q8NEV9 243 aa23.71■■□□□ 1.39
IMP4-209ENST00000462357 CCDC12Q8WUD4 166 aaPredicted RBP23.71■■□□□ 1.39
IMP4-209ENST00000462357 DPF3Q92784 378 aa23.71■■□□□ 1.39
IMP4-209ENST00000462357 AP5M1Q9H0R1 490 aa23.71■■□□□ 1.39
IMP4-209ENST00000462357 ZEB2O60315 1214 aa23.7■■□□□ 1.38
IMP4-209ENST00000462357 PDIA3P30101 505 aaKnown RBP23.7■■□□□ 1.38
IMP4-209ENST00000462357 BRDTQ58F21 947 aaPredicted RBP23.7■■□□□ 1.38
IMP4-209ENST00000462357 EHMT1Q9H9B1 1298 aa23.7■■□□□ 1.38
IMP4-209ENST00000462357 Q9Y3F1 56 aa23.7■■□□□ 1.38
IMP4-209ENST00000462357 NKRFO15226 690 aaKnown RBP eCLIP23.69■■□□□ 1.38
IMP4-209ENST00000462357 EIF3JO75822 258 aaKnown RBP23.69■■□□□ 1.38
IMP4-209ENST00000462357 ADD1P35611 737 aaKnown RBP23.69■■□□□ 1.38
IMP4-209ENST00000462357 SLC35G1Q2M3R5 365 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 PPP1R18Q6NYC8 613 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 EEPD1Q7L9B9 569 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 PCSK9Q8NBP7 692 aaKnown RBP23.69■■□□□ 1.38
IMP4-209ENST00000462357 SCFD2Q8WU76 684 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 TBC1D5Q92609 795 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 TAAR1Q96RJ0 339 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 GTF3C3Q9Y5Q9 886 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 NR2E3Q9Y5X4 410 aa23.69■■□□□ 1.38
IMP4-209ENST00000462357 RBBP6Q7Z6E9 1792 aaKnown RBP23.69■■□□□ 1.38
IMP4-209ENST00000462357 CDKL5O76039 1030 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 EDNRBP24530 442 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 C8orf34Q49A92 452 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 ANO1Q5XXA6 986 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 KCNV1Q6PIU1 500 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 UBE2Q1Q7Z7E8 422 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 FCHSD1Q86WN1 690 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 IL17RAQ96F46 866 aa23.68■■□□□ 1.38
IMP4-209ENST00000462357 PURBQ96QR8 312 aaKnown RBP23.68■■□□□ 1.38
IMP4-209ENST00000462357 TSEN34Q9BSV6 310 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms