RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 PDGFCQ9NRA1 345 aa18.82■□□□□ 0.6
SNX21-206ENST00000462307 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
SNX21-206ENST00000462307 SLC27A2O14975 620 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 IRX5P78411 483 aaPredicted RBP18.81■□□□□ 0.6
SNX21-206ENST00000462307 SLC35G1Q2M3R5 365 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 TRIM60Q495X7 471 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 FBXO11Q86XK2 927 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 CCDC136Q96JN2 1154 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
SNX21-206ENST00000462307 ELP1O95163 1332 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 LAMA2P24043 3122 aaKnown RBP18.8■□□□□ 0.6
SNX21-206ENST00000462307 ASGR1P07306 291 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 C6orf222P0C671 652 aaPredicted RBP18.8■□□□□ 0.6
SNX21-206ENST00000462307 SMPD1P17405 629 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 CALML3P27482 149 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 CDK7P50613 346 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 GHRHRQ02643 423 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 GNASQ5JWF2 1037 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 CREB3L3Q68CJ9 461 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 ANKRD33Q7Z3H0 272 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 TOX2Q96NM4 488 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 ATP11BQ9Y2G3 1177 aa18.8■□□□□ 0.6
SNX21-206ENST00000462307 MRPL11Q9Y3B7 192 aaKnown RBP18.8■□□□□ 0.6
SNX21-206ENST00000462307 ZBTB5O15062 677 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 CYTH3O43739 400 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 TLE2Q04725 743 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 TSGA10IPQ3SY00 556 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 TMEM67Q5HYA8 995 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 MCF2L2Q86YR7 1114 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
SNX21-206ENST00000462307 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 SAMD3Q8N6K7 520 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 AMNQ9BXJ7 453 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 STARD7Q9NQZ5 370 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
SNX21-206ENST00000462307 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
SNX21-206ENST00000462307 KIAA1217Q5T5P2 1943 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 OPLAHO14841 1288 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 PPP1R11O60927 126 aaPredicted RBP18.78■□□□□ 0.6
SNX21-206ENST00000462307 MCM5P33992 734 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 COL9A3Q14050 684 aaPredicted RBP18.78■□□□□ 0.6
SNX21-206ENST00000462307 DUSP28Q4G0W2 176 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 SYTL5Q8TDW5 730 aaPredicted RBP18.78■□□□□ 0.6
SNX21-206ENST00000462307 TMEM87BQ96K49 555 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 GLT1D1Q96MS3 346 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
SNX21-206ENST00000462307 PDLIM7Q9NR12 457 aa18.78■□□□□ 0.6
SNX21-206ENST00000462307 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 B4DLN1 442 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 DYNC1LI2O43237 492 aaPredicted RBP18.77■□□□□ 0.6
SNX21-206ENST00000462307 DHX16O60231 1041 aaKnown RBP18.77■□□□□ 0.6
SNX21-206ENST00000462307 SMARCA1P28370 1054 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 LIFRP42702 1097 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 MRPL12P52815 198 aaKnown RBP18.77■□□□□ 0.6
SNX21-206ENST00000462307 MDM2Q00987 491 aaPredicted RBP18.77■□□□□ 0.6
SNX21-206ENST00000462307 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 TRIM43Q96BQ3 446 aaPredicted RBP18.77■□□□□ 0.6
SNX21-206ENST00000462307 TAAR1Q96RJ0 339 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 COL20A1Q9P218 1284 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 PRKAG2Q9UGJ0 569 aa18.77■□□□□ 0.6
SNX21-206ENST00000462307 PRC1O43663 620 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 CDC45O75419 566 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 HSD17B4P51659 736 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 LRIT3Q3SXY7 679 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
SNX21-206ENST00000462307 SH3RF1Q7Z6J0 888 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 TDHQ8IZJ6 230 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 SLC43A3Q8NBI5 491 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 IWS1Q96ST2 819 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 WDR11Q9BZH6 1224 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 UBE2OQ9C0C9 1292 aaKnown RBP18.76■□□□□ 0.59
SNX21-206ENST00000462307 AP5M1Q9H0R1 490 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
SNX21-206ENST00000462307 PCDH10Q9P2E7 1040 aa18.76■□□□□ 0.59
SNX21-206ENST00000462307 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 SH2B2O14492 632 aaPredicted RBP18.75■□□□□ 0.59
SNX21-206ENST00000462307 KIAA0355O15063 1070 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 NKRFO15226 690 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNX21-206ENST00000462307 CABYRO75952 493 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 DDAH1O94760 285 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 CLTBP09497 229 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 BEX3Q00994 111 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 PDE4DQ08499 809 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 FAAP100Q0VG06 881 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 TRAF1Q13077 416 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
SNX21-206ENST00000462307 RNF20Q5VTR2 975 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 ZNF654Q8IZM8 581 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 NSUN6Q8TEA1 469 aaKnown RBP18.75■□□□□ 0.59
SNX21-206ENST00000462307 PIGSQ96S52 555 aa18.75■□□□□ 0.59
SNX21-206ENST00000462307 LBHD1Q9BQE6 289 aaPredicted RBP18.75■□□□□ 0.59
SNX21-206ENST00000462307 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms