RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CFHR5Q9BXR6 569 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 MOV10L1Q9BXT6 1211 aaKnown RBP12.2□□□□□ -0.46
RTF1-202ENST00000462276 PCDHA6Q9UN73 950 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 PCDHA8Q9Y5H6 950 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
RTF1-202ENST00000462276 LOC102724159A0A0B4J2E5 919 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 B4DLN1 442 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 OPLAHO14841 1288 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 CNMDO75829 334 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 CFBP00751 764 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 MAPK4P31152 587 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 USP11P51784 963 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 KRT85P78386 507 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 NR5A1Q13285 461 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 PWP2Q15269 919 aaKnown RBP12.19□□□□□ -0.46
RTF1-202ENST00000462276 COL13A1Q5TAT6 717 aaPredicted RBP12.19□□□□□ -0.46
RTF1-202ENST00000462276 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 XRRA1Q6P2D8 792 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 RNF207Q6ZRF8 634 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 TNPO1Q92973 898 aaKnown RBP12.19□□□□□ -0.46
RTF1-202ENST00000462276 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
RTF1-202ENST00000462276 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 CEP131Q9UPN4 1083 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 RIPK3Q9Y572 518 aa12.19□□□□□ -0.46
RTF1-202ENST00000462276 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
RTF1-202ENST00000462276 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
RTF1-202ENST00000462276 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 BCRP11274 1271 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 FCER1AP12319 257 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
RTF1-202ENST00000462276 ERCC3P19447 782 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 VEGFBP49765 207 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 RPS6P62753 249 aaKnown RBP12.18□□□□□ -0.46
RTF1-202ENST00000462276 KCTD2Q14681 263 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 USP17L6PQ6QN14 398 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 MOXD1Q6UVY6 613 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 C17orf99Q6UX52 265 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 PIK3AP1Q6ZUJ8 805 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 NEK8Q86SG6 692 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 ANKRD13CQ8N6S4 541 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 SYTL5Q8TDW5 730 aaPredicted RBP12.18□□□□□ -0.46
RTF1-202ENST00000462276 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 BIN2Q9UBW5 565 aaPredicted RBP12.18□□□□□ -0.46
RTF1-202ENST00000462276 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
RTF1-202ENST00000462276 KIF28PB7ZC32 967 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 GOLGA6L22H0YM25 854 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 NFIBO00712 420 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 CYP3A4P08684 503 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 SREBF1P36956 1147 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 GRM1Q13255 1194 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 Q3C1V9 767 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 MUM1L1Q5H9M0 696 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 FOXD4L5Q5VV16 416 aaPredicted RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 JAKMIP3Q5VZ66 844 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 ANKRD35Q8N283 1001 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 NSUN6Q8TEA1 469 aaKnown RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 FOXD4L4Q8WXT5 416 aaPredicted RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 IWS1Q96ST2 819 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 SLC5A4Q9NY91 659 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 RTEL1Q9NZ71 1219 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
RTF1-202ENST00000462276 IVNS1ABPQ9Y6Y0 642 aa12.17□□□□□ -0.46
RTF1-202ENST00000462276 CYP3A7-CYP3A51PA0A087WV96 503 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 LAD1O00515 517 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 AOC2O75106 756 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 STAM2O75886 525 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 YEATS4O95619 227 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 CYP3A7P24462 503 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 CIITAP33076 1130 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 MAP2K1Q02750 393 aaPredicted RBP12.16□□□□□ -0.46
RTF1-202ENST00000462276 CRHR2Q13324 411 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 UBE2SQ16763 222 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 NOM1Q5C9Z4 860 aaKnown RBP12.16□□□□□ -0.46
RTF1-202ENST00000462276 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
RTF1-202ENST00000462276 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
RTF1-202ENST00000462276 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
RTF1-202ENST00000462276 PTMSP20962 102 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
RTF1-202ENST00000462276 NASPP49321 788 aaPredicted RBP12.15□□□□□ -0.46
RTF1-202ENST00000462276 ARHGAP4P98171 946 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 DNM1Q05193 864 aaKnown RBP12.15□□□□□ -0.46
RTF1-202ENST00000462276 INF2Q27J81 1249 aa12.15□□□□□ -0.46
RTF1-202ENST00000462276 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms