RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 KRT1P04264 644 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 SRFP11831 508 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 GLDCP23378 1020 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 TNNI2P48788 182 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 ERVFC1P60507 584 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 DAB2P98082 770 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 XPCQ01831 940 aaPredicted RBP7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 TMEM201Q5SNT2 666 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 LCNL1Q6ZST4 164 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 LILRA2Q8N149 483 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 PPP1R13LQ8WUF5 828 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 BRD4O60885 1362 aaPredicted RBP7.54□□□□□ -1.2
THUMPD3-207ENST00000461636 ACEP12821 1306 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 FITM1A5D6W6 292 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 WASH4PA8MWX3 477 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 NPIPB6E9PJ23 425 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 CILPO75339 1184 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 MED14OSP0DP75 135 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 NCLP19338 710 aaKnown RBP7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 KCNA10Q16322 511 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 ATG14Q6ZNE5 492 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 SLFN12Q8IYM2 578 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 PMFBP1Q8TBY8 1022 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 KRTAP4-9Q9BYQ8 210 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 CD320Q9NPF0 282 aa7.53□□□□□ -1.2
THUMPD3-207ENST00000461636 SPATA31A6Q5VVP1 1343 aa7.52□□□□□ -1.2
THUMPD3-207ENST00000461636 LMNB2Q03252 620 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 CIAPIN1Q6FI81 312 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 BNC2Q6ZN30 1099 aaPredicted RBP7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 KRT28Q7Z3Y7 464 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 LRRC59Q96AG4 307 aaKnown RBP7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 CRELD1Q96HD1 420 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 ASPNQ9BXN1 380 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 RNF32Q9H0A6 362 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 PPP1R1BQ9UD71 204 aaPredicted RBP7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 SLIT3O75094 1523 aa7.52□□□□□ -1.21
THUMPD3-207ENST00000461636 A0A1W2PP64 1363 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 ARHGEF10O15013 1369 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 USP31Q70CQ4 1352 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 KTN1Q86UP2 1357 aaKnown RBP7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 UPK3BL1B0FP48 263 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 UPK3BL2E5RIL1 263 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 ZGLP1P0C6A0 271 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 CHMP4BP1P59074 171 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 CAMK2GQ13555 558 aaPredicted RBP7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 NAALADL2Q58DX5 795 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 IRF2BP1Q8IU81 584 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 PCDHA11Q9Y5I1 949 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 USP19O94966 1318 aa7.51□□□□□ -1.21
THUMPD3-207ENST00000461636 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 ANKRD36BQ8N2N9 1353 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 FAM221AA4D161 298 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 ETV2O00321 342 aaPredicted RBP7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 CHRNEQ04844 493 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 DUSP4Q13115 394 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 PWP1Q13610 501 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 KCNN1Q92952 543 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 SLC12A5Q9H2X9 1139 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 CWC22Q9HCG8 908 aaKnown RBP7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 REV1Q9UBZ9 1251 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 KLHL3Q9UH77 587 aa7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 EDC4Q6P2E9 1401 aaKnown RBP7.5□□□□□ -1.21
THUMPD3-207ENST00000461636 NFAT5O94916 1531 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 LMO7Q8WWI1 1683 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 RBAK-RBAKDNI3L0D1 243 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 RECKO95980 971 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 F13A1P00488 732 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 PF4P02776 101 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 NR0B2Q15466 257 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 SPPL2CQ8IUH8 684 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 RELL1Q8IUW5 271 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 NGDNQ8NEJ9 315 aaKnown RBP7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 KREMEN1Q96MU8 473 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 KCNK12Q9HB15 430 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 MRS2Q9HD23 443 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 OVOS2A0A0J9YW53 1432 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 OVOS2Q6IE36 1432 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 NRAPQ86VF7 1730 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 NWD2Q9ULI1 1742 aa7.49□□□□□ -1.21
THUMPD3-207ENST00000461636 COL18A1P39060 1754 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 SLIT2O94813 1529 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 PLCH1Q4KWH8 1693 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 KIF20BQ96Q89 1820 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 CTSHP09668 335 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 GBP2P32456 591 aaPredicted RBP7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 CLEC16AQ2KHT3 1053 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 SNAP47Q5SQN1 464 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 AMIGO3Q86WK7 504 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 PHACTR4Q8IZ21 702 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 ANKS4BQ8N8V4 417 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 RHOVQ96L33 236 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 TMEM74Q96NL1 305 aa7.48□□□□□ -1.21
THUMPD3-207ENST00000461636 ASCC2Q9H1I8 757 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms