RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 TRERF1Q96PN7 1200 aa15.2■□□□□ 0.02
C9orf78-202ENST00000461349 PAG1Q9NWQ8 432 aa15.2■□□□□ 0.02
C9orf78-202ENST00000461349 RAD50Q92878 1312 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 LCHNA4D1U4 455 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
C9orf78-202ENST00000461349 BMP3P12645 472 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 ALAS1P13196 640 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 STAT2P52630 851 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 LRRFIP1Q32MZ4 808 aaKnown RBP15.19■□□□□ 0.02
C9orf78-202ENST00000461349 SLFNL1Q499Z3 407 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
C9orf78-202ENST00000461349 FTSJ3Q8IY81 847 aaKnown RBP15.19■□□□□ 0.02
C9orf78-202ENST00000461349 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
C9orf78-202ENST00000461349 CRBNQ96SW2 442 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 SYNPO2Q9UMS6 1093 aa15.19■□□□□ 0.02
C9orf78-202ENST00000461349 ZNF318Q5VUA4 2279 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 TMEM232C9JQI7 657 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 WDR5P61964 334 aaKnown RBP15.18■□□□□ 0.02
C9orf78-202ENST00000461349 PTPN11Q06124 597 aaPredicted RBP15.18■□□□□ 0.02
C9orf78-202ENST00000461349 UBE3CQ15386 1083 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 TMEM63BQ5T3F8 832 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 ZSCAN25Q6NSZ9 544 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 ITPRIPQ8IWB1 547 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 CHURC1Q8WUH1 139 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 MKL1Q969V6 931 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 SUGCTQ9HAC7 445 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 ZNF287Q9HBT7 754 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 FAM50BQ9Y247 325 aa15.18■□□□□ 0.02
C9orf78-202ENST00000461349 DDX49Q9Y6V7 483 aaKnown RBP15.18■□□□□ 0.02
C9orf78-202ENST00000461349 GRXCR2A6NFK2 248 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 TTLL1O95922 423 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 SLFN13Q68D06 897 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 FAM160B2Q86V87 743 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 ZNF444Q8N0Y2 327 aaPredicted RBP15.17■□□□□ 0.02
C9orf78-202ENST00000461349 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
C9orf78-202ENST00000461349 OR6J1Q8NGC5 347 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 RAD9AQ99638 391 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 WDR11Q9BZH6 1224 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 CYP39A1Q9NYL5 469 aa15.17■□□□□ 0.02
C9orf78-202ENST00000461349 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
C9orf78-202ENST00000461349 NLRC5Q86WI3 1866 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 MINDY4BA8MYZ0 360 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 KPNA6O60684 536 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 ERVK-21P61565 698 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 CEP85Q6P2H3 762 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 NSMFQ6X4W1 530 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 TMCO2Q7Z6W1 182 aaPredicted RBP15.16■□□□□ 0.02
C9orf78-202ENST00000461349 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 AFAP1L1Q8TED9 768 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 CEP95Q96GE4 821 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 MFSD14AQ96MC6 490 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
C9orf78-202ENST00000461349 IGKV6D-41A0A0C4DH26 115 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 GJB5O95377 273 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 CNKSR3Q6P9H4 555 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 MORC4Q8TE76 937 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 STAG1Q8WVM7 1258 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 UPF3BQ9BZI7 483 aaKnown RBP15.15■□□□□ 0.02
C9orf78-202ENST00000461349 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 PRKAG3Q9UGI9 489 aa15.15■□□□□ 0.02
C9orf78-202ENST00000461349 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.01
C9orf78-202ENST00000461349 EFCAB14O75071 495 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 PARNO95453 639 aaKnown RBP15.14■□□□□ 0.01
C9orf78-202ENST00000461349 SLC1A4P43007 532 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 CHMP4BP1P59074 171 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 DEFB103AP81534 67 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 PTGISQ16647 500 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 PTPROQ16827 1216 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 FBXO22Q8NEZ5 403 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 NEK9Q8TD19 979 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 KIF1BPQ96EK5 621 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 PUS7LQ9H0K6 701 aaKnown RBP15.14■□□□□ 0.01
C9orf78-202ENST00000461349 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
C9orf78-202ENST00000461349 LOC102724159A0A0B4J2E5 919 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 ABHD14A-ACY1A0A1B0GW23 586 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 H3BQ06 376 aaPredicted RBP15.13■□□□□ 0.01
C9orf78-202ENST00000461349 ST18O60284 1047 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 SELPP16109 830 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 ALDH5A1P51649 535 aaPredicted RBP15.13■□□□□ 0.01
C9orf78-202ENST00000461349 PPP2R5BQ15173 497 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 PWP2Q15269 919 aaKnown RBP15.13■□□□□ 0.01
C9orf78-202ENST00000461349 TIGD5Q53EQ6 642 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 MUM1L1Q5H9M0 696 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 EP400NLQ6ZTU2 488 aa15.13■□□□□ 0.01
C9orf78-202ENST00000461349 HFE2Q6ZVN8 426 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms