RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 SEC23AQ15436 765 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 ASPRV1Q53RT3 343 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 C9orf50Q5SZB4 431 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 TMEM63BQ5T3F8 832 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 EEPD1Q7L9B9 569 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 KAT14Q9H8E8 782 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 MROH7Q68CQ1 1323 aa11.31□□□□□ -0.6
CD40-203ENST00000461171 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
CD40-203ENST00000461171 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
CD40-203ENST00000461171 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 SGSM2O43147 1006 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 CYP21A2P08686 494 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 EPHB4P54760 987 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 BEX3Q00994 111 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 PTH1RQ03431 593 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 SHHQ15465 462 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
CD40-203ENST00000461171 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
CD40-203ENST00000461171 DUSP28Q4G0W2 176 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 Q7L0L9 218 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 CYB5R4Q7L1T6 521 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 FAM126BQ8IXS8 530 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 DEFB123Q8N688 67 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 SLC43A3Q8NBI5 491 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 MAF1Q9H063 256 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 Q9Y3F1 56 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 TAF6LQ9Y6J9 622 aa11.3□□□□□ -0.6
CD40-203ENST00000461171 DCDC2CA8MYV0 355 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 ARVCFO00192 962 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
CD40-203ENST00000461171 RAG1P15918 1043 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 CALML3P27482 149 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 USH1GQ495M9 461 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 FAM109BQ6ICB4 259 aaPredicted RBP11.29□□□□□ -0.6
CD40-203ENST00000461171 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
CD40-203ENST00000461171 ADGRF4Q8IZF3 695 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 DNERQ8NFT8 737 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 GRIN2DO15399 1336 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 ABCB11O95342 1321 aa11.29□□□□□ -0.6
CD40-203ENST00000461171 CABYRO75952 493 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 TIMP1P01033 207 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 CD4P01730 458 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 GHRHRQ02643 423 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 FPGSQ05932 587 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 IFIT1BQ5T764 474 aaKnown RBP11.28□□□□□ -0.6
CD40-203ENST00000461171 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 STOX1Q6ZVD7 989 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 MTMR8Q96EF0 704 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 AP5M1Q9H0R1 490 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
CD40-203ENST00000461171 OPLAHO14841 1288 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.61
CD40-203ENST00000461171 MFSD5Q6N075 450 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
CD40-203ENST00000461171 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 MAP4K1Q92918 833 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 MAD2L2Q9UI95 211 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 MYH6P13533 1939 aa11.27□□□□□ -0.61
CD40-203ENST00000461171 PALM3A6NDB9 673 aaPredicted RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 E7EWF7 191 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 ZEB2O60315 1214 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 ANTXR2P58335 489 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 SMAD3P84022 425 aaKnown RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 PDE4DQ08499 809 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 TROAPQ12815 778 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 TRDNQ13061 729 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 GRM4Q14833 912 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 PPP2R5BQ15173 497 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 MPHOSPH6Q99547 160 aaKnown RBP11.26□□□□□ -0.61
CD40-203ENST00000461171 SEZ6LQ9BYH1 1024 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
CD40-203ENST00000461171 A6NJR5 290 aa11.25□□□□□ -0.61
CD40-203ENST00000461171 KLRF2D3W0D1 207 aa11.25□□□□□ -0.61
CD40-203ENST00000461171 ZBTB5O15062 677 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms