RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 ASTN2O75129 1339 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF646O15015 1829 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 A0A087WWV3 80 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 PNMA6AP0CW24 399 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 PLCG2P16885 1265 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 YBX3P16989 372 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 CDK8P49336 464 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ETF1P62495 437 aaKnown RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 PDE4BQ07343 736 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 TMED1Q13445 227 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 STK38Q15208 465 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 CIAPIN1Q6FI81 312 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ARMCX5Q6P1M9 558 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ELOA2Q8IYF1 753 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 RMDN2Q96LZ7 410 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ST7Q9NRC1 585 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 FHOD1Q9Y613 1164 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 BRCA1P38398 1863 aaKnown RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ERICH2A1L162 156 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 RTN2O75298 545 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 SLC3A2P08195 630 aaKnown RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 FGRP09769 529 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 METAP2P50579 478 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 NLRP12P59046 1061 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 SEC23AQ15436 765 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 SBK1Q52WX2 424 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ACBD5Q5T8D3 534 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 AMOTL1Q8IY63 956 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ANKRD13AQ8IZ07 590 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-219ENST00000461159 GMLQ99445 158 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 IL17RBQ9NRM6 502 aa9.5□□□□□ -0.89
HDAC9-219ENST00000461159 A0A1B0GVL5 298 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 CPLX1O14810 134 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 ZBTB43O43298 467 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 CBFA2T2O43439 604 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 ATP8B1O43520 1251 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 TSPY3P0CV98 308 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 TSPY8P0CW00 308 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 VCAM1P19320 739 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 MRPL12P52815 198 aaKnown RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 DLGAP5Q15398 846 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 DPCR1Q3MIW9 517 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 TBC1D10BQ4KMP7 808 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 IFIT1BQ5T764 474 aaKnown RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 IQCA1Q86XH1 822 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 PIAS4Q8N2W9 510 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF541Q9H0D2 1346 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 YEATS4O95619 227 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 VDRP11473 427 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 RASA1P20936 1047 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 ACTN2P35609 894 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 NDUFA8P51970 172 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 SGMS1Q86VZ5 419 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 TCP11Q8WWU5 503 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 IRX2Q9BZI1 471 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 ORC3Q9UBD5 711 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-219ENST00000461159 DNAI1Q9UI46 699 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 MCM8Q9UJA3 840 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
HDAC9-219ENST00000461159 FER1L6Q2WGJ9 1857 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 MYH1P12882 1939 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 HMGB1P1B2RPK0 211 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 WNT10BO00744 389 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 IKBKBO14920 756 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 GUCY1A2P33402 732 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 LIFRP42702 1097 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 GMPSP49915 693 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 ATP2B2Q01814 1243 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 NTRK3Q16288 839 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 PRAMEF18Q5VWM3 479 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 MIGA2Q7L4E1 593 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 LINC00301Q8NCQ3 95 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 TMEM39BQ9GZU3 492 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 CPVLQ9H3G5 476 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 UNC45AQ9H3U1 944 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 LAMB1P07942 1786 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 A0A087WUV0 522 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 EFCAB8A8MWE9 144 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 SPTLC2O15270 562 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 ZSCAN12O43309 604 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 AKR1B1P15121 316 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF24P17028 368 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 TPP2P29144 1249 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 FANCCQ00597 558 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 ZFYVE27Q5T4F4 411 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms