RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 ALX1Q15699 326 aa25.89■■□□□ 1.74
HMG20B-207ENST00000461099 ALDH8A1Q9H2A2 487 aaPredicted RBP25.89■■□□□ 1.74
HMG20B-207ENST00000461099 YBX2Q9Y2T7 364 aaKnown RBP25.89■■□□□ 1.74
HMG20B-207ENST00000461099 SALL3Q9BXA9 1300 aa25.88■■□□□ 1.73
HMG20B-207ENST00000461099 LOC102724159A0A0B4J2E5 919 aa25.88■■□□□ 1.73
HMG20B-207ENST00000461099 TNFRSF10AO00220 468 aa25.88■■□□□ 1.73
HMG20B-207ENST00000461099 IGFBP4P22692 258 aa25.88■■□□□ 1.73
HMG20B-207ENST00000461099 ALDH5A1P51649 535 aaPredicted RBP25.88■■□□□ 1.73
HMG20B-207ENST00000461099 PWP2Q15269 919 aaKnown RBP25.88■■□□□ 1.73
HMG20B-207ENST00000461099 SYDE2Q5VT97 1194 aa25.88■■□□□ 1.73
HMG20B-207ENST00000461099 WDR11Q9BZH6 1224 aa25.88■■□□□ 1.73
HMG20B-207ENST00000461099 NFIBO00712 420 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 TOP1P11387 765 aaKnown RBP25.87■■□□□ 1.73
HMG20B-207ENST00000461099 EVI5LQ96CN4 794 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 TOMM22Q9NS69 142 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 POLR3EQ9NVU0 708 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 THEGQ9P2T0 379 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 SLC4A7Q9Y6M7 1214 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 GBF1Q92538 1859 aa25.87■■□□□ 1.73
HMG20B-207ENST00000461099 SUPT20HL2P0C7V6 817 aa25.86■■□□□ 1.73
HMG20B-207ENST00000461099 CCDC85BQ15834 202 aaPredicted RBP25.86■■□□□ 1.73
HMG20B-207ENST00000461099 VWCEQ96DN2 955 aa25.86■■□□□ 1.73
HMG20B-207ENST00000461099 SCLYQ96I15 445 aa25.86■■□□□ 1.73
HMG20B-207ENST00000461099 ASB2Q96Q27 587 aa25.86■■□□□ 1.73
HMG20B-207ENST00000461099 TMEM47Q9BQJ4 181 aa25.86■■□□□ 1.73
HMG20B-207ENST00000461099 HELLSQ9NRZ9 838 aa25.86■■□□□ 1.73
HMG20B-207ENST00000461099 RBM47A0AV96 593 aaKnown RBP25.85■■□□□ 1.73
HMG20B-207ENST00000461099 PTPDC1A2A3K4 754 aa25.85■■□□□ 1.73
HMG20B-207ENST00000461099 FGAP02671 866 aa25.85■■□□□ 1.73
HMG20B-207ENST00000461099 CPT1AP50416 773 aa25.85■■□□□ 1.73
HMG20B-207ENST00000461099 RABGGTBP53611 331 aa25.85■■□□□ 1.73
HMG20B-207ENST00000461099 PURAQ00577 322 aaKnown RBP25.85■■□□□ 1.73
HMG20B-207ENST00000461099 RRP12Q5JTH9 1297 aaKnown RBP25.85■■□□□ 1.73
HMG20B-207ENST00000461099 GPCPD1Q9NPB8 672 aa25.85■■□□□ 1.73
HMG20B-207ENST00000461099 TCP11L1Q9NUJ3 509 aa25.85■■□□□ 1.73
HMG20B-207ENST00000461099 TRMT13Q9NUP7 481 aaKnown RBP25.85■■□□□ 1.73
HMG20B-207ENST00000461099 ZBTB47Q9UFB7 747 aaPredicted RBP25.85■■□□□ 1.73
HMG20B-207ENST00000461099 FRMPD2Q68DX3 1309 aaPredicted RBP25.85■■□□□ 1.73
HMG20B-207ENST00000461099 CLEC4DQ8WXI8 215 aa25.84■■□□□ 1.73
HMG20B-207ENST00000461099 PCDHA11Q9Y5I1 949 aa25.84■■□□□ 1.73
HMG20B-207ENST00000461099 PFKMP08237 780 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 MYL3P08590 195 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 CYP2C9P11712 490 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 CALML3P27482 149 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 MRPS5P82675 430 aaKnown RBP25.83■■□□□ 1.73
HMG20B-207ENST00000461099 ANKRD45Q5TZF3 282 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 GPHNQ9NQX3 736 aaPredicted RBP25.83■■□□□ 1.73
HMG20B-207ENST00000461099 PNMA2Q9UL42 364 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 TNKSO95271 1327 aa25.83■■□□□ 1.73
HMG20B-207ENST00000461099 ZBBXA8MT70 800 aa25.82■■□□□ 1.72
HMG20B-207ENST00000461099 MYOGP15173 224 aa25.82■■□□□ 1.72
HMG20B-207ENST00000461099 PPP2R2DQ66LE6 453 aa25.82■■□□□ 1.72
HMG20B-207ENST00000461099 SLC30A10Q6XR72 485 aa25.82■■□□□ 1.72
HMG20B-207ENST00000461099 RNF207Q6ZRF8 634 aa25.82■■□□□ 1.72
HMG20B-207ENST00000461099 OR6J1Q8NGC5 347 aa25.82■■□□□ 1.72
HMG20B-207ENST00000461099 MTG1Q9BT17 334 aaPredicted RBP25.82■■□□□ 1.72
HMG20B-207ENST00000461099 REV3LO60673 3130 aa25.81■■□□□ 1.72
HMG20B-207ENST00000461099 PDHBP11177 359 aa25.81■■□□□ 1.72
HMG20B-207ENST00000461099 ATP2A2P16615 1042 aaKnown RBP25.81■■□□□ 1.72
HMG20B-207ENST00000461099 MCMDC2Q4G0Z9 681 aa25.81■■□□□ 1.72
HMG20B-207ENST00000461099 BRDTQ58F21 947 aaPredicted RBP25.81■■□□□ 1.72
HMG20B-207ENST00000461099 FAM227BQ96M60 508 aa25.81■■□□□ 1.72
HMG20B-207ENST00000461099 NKRFO15226 690 aaKnown RBP eCLIP25.8■■□□□ 1.72
HMG20B-207ENST00000461099 PDE1AP54750 535 aa25.8■■□□□ 1.72
HMG20B-207ENST00000461099 PDE4DQ08499 809 aa25.8■■□□□ 1.72
HMG20B-207ENST00000461099 TTLL4Q14679 1199 aa25.8■■□□□ 1.72
HMG20B-207ENST00000461099 NBPF20Q3BBV1 942 aa25.8■■□□□ 1.72
HMG20B-207ENST00000461099 TTC14Q96N46 770 aa25.8■■□□□ 1.72
HMG20B-207ENST00000461099 MPHOSPH6Q99547 160 aaKnown RBP25.8■■□□□ 1.72
HMG20B-207ENST00000461099 A0A0D9SFI3 127 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 HSPD1P10809 573 aaKnown RBP25.79■■□□□ 1.72
HMG20B-207ENST00000461099 EDNRBP24530 442 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 RPS6P62753 249 aaKnown RBP25.79■■□□□ 1.72
HMG20B-207ENST00000461099 ZNF543Q08ER8 600 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 PPP2R5BQ15173 497 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 DEFB128Q7Z7B8 93 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 TICAM2Q86XR7 235 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 DNERQ8NFT8 737 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 ADAMTS19Q8TE59 1207 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 SCFD2Q8WU76 684 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 RAD50Q92878 1312 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 TRANK1O15050 2925 aa25.79■■□□□ 1.72
HMG20B-207ENST00000461099 XIRP2A4UGR9 3374 aa25.78■■□□□ 1.72
HMG20B-207ENST00000461099 A6NJR5 290 aa25.78■■□□□ 1.72
HMG20B-207ENST00000461099 KPNA6O60684 536 aa25.78■■□□□ 1.72
HMG20B-207ENST00000461099 FAM47CQ5HY64 1035 aa25.78■■□□□ 1.72
HMG20B-207ENST00000461099 NFRKBQ6P4R8 1299 aa25.78■■□□□ 1.72
HMG20B-207ENST00000461099 TSPYL2Q9H2G4 693 aaPredicted RBP25.78■■□□□ 1.72
HMG20B-207ENST00000461099 SCN10AQ9Y5Y9 1956 aa25.77■■□□□ 1.72
HMG20B-207ENST00000461099 SNHG28P0DPA3 235 aa25.77■■□□□ 1.72
HMG20B-207ENST00000461099 HAND2P61296 217 aa25.77■■□□□ 1.72
HMG20B-207ENST00000461099 TMEM67Q5HYA8 995 aa25.77■■□□□ 1.72
HMG20B-207ENST00000461099 ZMYM6O95789 1325 aa25.77■■□□□ 1.72
HMG20B-207ENST00000461099 WDR19Q8NEZ3 1342 aa25.77■■□□□ 1.72
HMG20B-207ENST00000461099 B4DLN1 442 aa25.76■■□□□ 1.71
HMG20B-207ENST00000461099 PCP11498 1178 aaKnown RBP25.76■■□□□ 1.71
HMG20B-207ENST00000461099 ACTN1P12814 892 aa25.76■■□□□ 1.71
HMG20B-207ENST00000461099 RFC2P35250 354 aa25.76■■□□□ 1.71
HMG20B-207ENST00000461099 MRPL12P52815 198 aaKnown RBP25.76■■□□□ 1.71
HMG20B-207ENST00000461099 MFSD6Q6ZSS7 791 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms