RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.02□□□□□ -1.29
NUP98-208ENST00000461047 CABP5Q9NP86 173 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 BRD7Q9NPI1 651 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 GINM1Q9NU53 330 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 SAP30BPQ9UHR5 308 aaKnown RBP7.02□□□□□ -1.29
NUP98-208ENST00000461047 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 PALD1Q9ULE6 856 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 PCDHAC2Q9Y5I4 1007 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 SBF1O95248 1867 aa7.02□□□□□ -1.29
NUP98-208ENST00000461047 TIAM2Q8IVF5 1701 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 ELOA3DA6NLF2 546 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 FAM196BA6NMK8 535 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L15C9J2P7 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L10C9JJH3 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L13C9JLJ4 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L11C9JVI0 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L18D6R9N7 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L22D6RA61 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L17D6RBQ6 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L19D6RCP7 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L20D6RJB6 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 EGFRP00533 1210 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 HMGB1P09429 215 aaKnown RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 PSMA5P28066 241 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 DGKGP49619 791 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 PPARAQ07869 468 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 USP17L24Q0WX57 530 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 NFIAQ12857 509 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 PTK7Q13308 1070 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 ELOA3BQ3SY89 546 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 MAP1SQ66K74 1059 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 CTR9Q6PD62 1173 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 LINC00114Q6XXX2 140 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 RALYLQ86SE5 291 aaKnown RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 ZNF589Q86UQ0 364 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 ANKMY2Q8IV38 441 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 ELOA3Q8NG57 546 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 SUSD3Q96L08 255 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 C2orf49Q9BVC5 232 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 GLIS2Q9BZE0 524 aaPredicted RBP7.01□□□□□ -1.29
NUP98-208ENST00000461047 TMEM39BQ9GZU3 492 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 TOMM22Q9NS69 142 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 KLF15Q9UIH9 416 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 KCNH4Q9UQ05 1017 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 CSADQ9Y600 493 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 WDR90Q96KV7 1748 aa7.01□□□□□ -1.29
NUP98-208ENST00000461047 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
NUP98-208ENST00000461047 ATRNL1Q5VV63 1379 aa7□□□□□ -1.29
NUP98-208ENST00000461047 SCN4AP35499 1836 aa7□□□□□ -1.29
NUP98-208ENST00000461047 ERICH2A1L162 156 aa7□□□□□ -1.29
NUP98-208ENST00000461047 ADM5C9JUS6 153 aa7□□□□□ -1.29
NUP98-208ENST00000461047 SIN3BO75182 1162 aa7□□□□□ -1.29
NUP98-208ENST00000461047 DKK1O94907 266 aa7□□□□□ -1.29
NUP98-208ENST00000461047 CHGBP05060 677 aa7□□□□□ -1.29
NUP98-208ENST00000461047 SPEM2Q0P670 501 aa7□□□□□ -1.29
NUP98-208ENST00000461047 SART3Q15020 963 aaKnown RBP7□□□□□ -1.29
NUP98-208ENST00000461047 VPS53Q5VIR6 699 aa7□□□□□ -1.29
NUP98-208ENST00000461047 ESR2Q92731 530 aa7□□□□□ -1.29
NUP98-208ENST00000461047 VTI1AQ96AJ9 217 aa7□□□□□ -1.29
NUP98-208ENST00000461047 CDCA5Q96FF9 252 aa7□□□□□ -1.29
NUP98-208ENST00000461047 SPOCK3Q9BQ16 436 aa7□□□□□ -1.29
NUP98-208ENST00000461047 ZNF408Q9H9D4 720 aa7□□□□□ -1.29
NUP98-208ENST00000461047 GBA2Q9HCG7 927 aaPredicted RBP7□□□□□ -1.29
NUP98-208ENST00000461047 DDX4Q9NQI0 724 aaKnown RBP7□□□□□ -1.29
NUP98-208ENST00000461047 PICK1Q9NRD5 415 aa7□□□□□ -1.29
NUP98-208ENST00000461047 ANAPC4Q9UJX5 808 aa7□□□□□ -1.29
NUP98-208ENST00000461047 HCN2Q9UL51 889 aa7□□□□□ -1.29
NUP98-208ENST00000461047 RBM8AQ9Y5S9 174 aaKnown RBP7□□□□□ -1.29
NUP98-208ENST00000461047 CCDC88AQ3V6T2 1871 aa7□□□□□ -1.29
NUP98-208ENST00000461047 ASTN2O75129 1339 aaPredicted RBP7□□□□□ -1.29
NUP98-208ENST00000461047 AKAP11Q9UKA4 1901 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 CNTNAP1P78357 1384 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 SCN9AQ15858 1988 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 DDTLA6NHG4 134 aaPredicted RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 SPDYE3A6NKU9 549 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 CTNND1O60716 968 aaKnown RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 CELF2O95319 508 aaKnown RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 ASNSP08243 561 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 TSPY3P0CV98 308 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 TSPY8P0CW00 308 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 RFX1P22670 979 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 CDK8P49336 464 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 ANAPC15P60006 121 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 PTH1RQ03431 593 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 SUZ12Q15022 739 aaKnown RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 CERKLQ49MI3 558 aaPredicted RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 AKNAD1Q5T1N1 836 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 NBPF12Q5TAG4 269 aaPredicted RBP6.99□□□□□ -1.29
NUP98-208ENST00000461047 CREB3L3Q68CJ9 461 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 C16orf86Q6ZW13 317 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 MIGA2Q7L4E1 593 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 IQCA1Q86XH1 822 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 ZFPM1Q8IX07 1006 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 ANKRD13AQ8IZ07 590 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 NCOA7Q8NI08 942 aa6.99□□□□□ -1.29
NUP98-208ENST00000461047 LSG1Q9H089 658 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms