RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 ADCK5Q3MIX3 580 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 SLFN13Q68D06 897 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 RNF135Q8IUD6 432 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 MB21D2Q8IYB1 491 aaPredicted RBP8.59□□□□□ -1.03
RTN4-212ENST00000461004 ANKRD13CQ8N6S4 541 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 SNIP1Q8TAD8 396 aaKnown RBP8.59□□□□□ -1.03
RTN4-212ENST00000461004 ESR2Q92731 530 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
RTN4-212ENST00000461004 PARK7Q99497 189 aaKnown RBP8.59□□□□□ -1.03
RTN4-212ENST00000461004 TANGO6Q9C0B7 1094 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 ZCCHC17Q9NP64 241 aaKnown RBP8.59□□□□□ -1.03
RTN4-212ENST00000461004 TCP11L1Q9NUJ3 509 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 BTBD7Q9P203 1132 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 RBPJLQ9UBG7 517 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 SLC45A1Q9Y2W3 748 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 LAMA4Q16363 1823 aa8.59□□□□□ -1.03
RTN4-212ENST00000461004 FKTNO75072 461 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 PCP11498 1178 aaKnown RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 CPA1P15085 419 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 SNAP25P60880 206 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 HERVK_113P62684 666 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 IRX3P78415 501 aaPredicted RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 SP3Q02447 781 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 SEC23AQ15436 765 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 NBPF20Q3BBV1 942 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 TTBK2Q6IQ55 1244 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 KCTD1Q719H9 257 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 ENAHQ8N8S7 591 aaPredicted RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 SMCR8Q8TEV9 937 aaPredicted RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 KCNB2Q92953 911 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 ATG4CQ96DT6 458 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 TCEANC2Q96MN5 208 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 PAGR1Q9BTK6 254 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 LRRC2Q9BYS8 371 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 KRT23Q9C075 422 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 PRDM10Q9NQV6 1147 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 MAFBQ9Y5Q3 323 aaPredicted RBP8.58□□□□□ -1.04
RTN4-212ENST00000461004 ZSWIM8A7E2V4 1837 aa8.58□□□□□ -1.04
RTN4-212ENST00000461004 TNKSO95271 1327 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 FRMPD2Q68DX3 1309 aaPredicted RBP8.57□□□□□ -1.04
RTN4-212ENST00000461004 ERVH48-1M5A8F1 160 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 WDR46O15213 610 aaKnown RBP8.57□□□□□ -1.04
RTN4-212ENST00000461004 ATP9BO43861 1147 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 FLOT1O75955 427 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 TOP1P11387 765 aaKnown RBP8.57□□□□□ -1.04
RTN4-212ENST00000461004 SKIP12755 728 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 SMPD1P17405 629 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 TAL1P17542 331 aaPredicted RBP8.57□□□□□ -1.04
RTN4-212ENST00000461004 HSPA4P34932 840 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 PABPC4Q13310 644 aaKnown RBP eCLIP8.57□□□□□ -1.04
RTN4-212ENST00000461004 COG2Q14746 738 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 TRAF7Q6Q0C0 670 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 DEPDC4Q8N2C3 294 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 GMCL1P1Q8NEA9 526 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 NCOA7Q8NI08 942 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 IGDCC4Q8TDY8 1250 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 ANKS1AQ92625 1134 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 LPAR1Q92633 364 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 CPVLQ9H3G5 476 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 SH2D4AQ9H788 454 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 SNX14Q9Y5W7 946 aa8.57□□□□□ -1.04
RTN4-212ENST00000461004 RLFQ13129 1914 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 TMEM232C9JQI7 657 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 IFIT3O14879 490 aaKnown RBP8.56□□□□□ -1.04
RTN4-212ENST00000461004 PRC1O43663 620 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 GOLGA8HP0CJ92 632 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 BMP3P12645 472 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 SLC16A2P36021 539 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 LACTBP83111 547 aaPredicted RBP8.56□□□□□ -1.04
RTN4-212ENST00000461004 TRDNQ13061 729 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
RTN4-212ENST00000461004 RALYLQ86SE5 291 aaKnown RBP8.56□□□□□ -1.04
RTN4-212ENST00000461004 DGKHQ86XP1 1220 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 RAB11FIP4Q86YS3 637 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 PLPP7Q8NBV4 271 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 ZNF592Q92610 1267 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 KIFC2Q96AC6 838 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 TRIM47Q96LD4 638 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 TTC14Q96N46 770 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 PORCNQ9H237 461 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 MORF4L1Q9UBU8 362 aa8.56□□□□□ -1.04
RTN4-212ENST00000461004 ISY1Q9ULR0 285 aaKnown RBP8.56□□□□□ -1.04
RTN4-212ENST00000461004 DOCK3Q8IZD9 2030 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
RTN4-212ENST00000461004 REC8O95072 547 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 PDHBP11177 359 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 RFX1P22670 979 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 SLC1A4P43007 532 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 PSMC4P43686 418 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 GCLCP48506 637 aaPredicted RBP8.55□□□□□ -1.04
RTN4-212ENST00000461004 ERVK-9P63128 1117 aa8.55□□□□□ -1.04
RTN4-212ENST00000461004 ERVK-24P63145 666 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms