RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 UBXN11Q5T124 520 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 ZFYVE27Q5T4F4 411 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 TMCO4Q5TGY1 634 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 LIPIQ6XZB0 460 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 B3GNT8Q7Z7M8 397 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 LSRQ86X29 649 aaPredicted RBP4.58□□□□□ -1.68
SYPL1-203ENST00000460770 SYT8Q8NBV8 401 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 NETO2Q8NC67 525 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 USP33Q8TEY7 942 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 TSPAN17Q96FV3 270 aa4.58□□□□□ -1.68
SYPL1-203ENST00000460770 DDX41Q9UJV9 622 aaKnown RBP4.58□□□□□ -1.68
SYPL1-203ENST00000460770 SCAMP3O14828 347 aaKnown RBP4.57□□□□□ -1.68
SYPL1-203ENST00000460770 AURKAO14965 403 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 GLI4P10075 376 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 PAMP19021 973 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 FBLN1P23142 703 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 GJA9P57773 515 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 ZYXQ15942 572 aaKnown RBP4.57□□□□□ -1.68
SYPL1-203ENST00000460770 POMZP3Q6PJE2 187 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 TTLL7Q6ZT98 887 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 SAPCD2Q86UD0 394 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 FNIP1Q8TF40 1166 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 CPA5Q8WXQ8 436 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 BDH2Q9BUT1 245 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 NTMQ9P121 344 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 PCDHGB7Q9Y5F8 929 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 BACE2Q9Y5Z0 518 aa4.57□□□□□ -1.68
SYPL1-203ENST00000460770 NPHP3-ACAD11A0A0J9YXS1 232 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 SH3D21A4FU49 640 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 C2orf71A6NGG8 1288 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 K7ESM1 405 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 STXBP3O00186 592 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 CBFA2T2O43439 604 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 NPHS1O60500 1241 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 ASGR2P07307 311 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 SOX9P48436 509 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 RUFY4Q6ZNE9 571 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 TP53I13Q8NBR0 393 aaPredicted RBP4.56□□□□□ -1.68
SYPL1-203ENST00000460770 ADCY4Q8NFM4 1077 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 RCC1LQ96I51 464 aaKnown RBP4.56□□□□□ -1.68
SYPL1-203ENST00000460770 KLHL25Q9H0H3 589 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 ADAM7Q9H2U9 754 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 SUGT1Q9Y2Z0 365 aa4.56□□□□□ -1.68
SYPL1-203ENST00000460770 SMARCA5O60264 1052 aaPredicted RBP4.55□□□□□ -1.68
SYPL1-203ENST00000460770 VAMP1P23763 118 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 HTRA3P83110 453 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 EFEMP1Q12805 493 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 ZNF827Q17R98 1081 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 NT5DC1Q5TFE4 455 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 WWC2Q6AWC2 1192 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 FAM124AQ86V42 546 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 DCP2Q8IU60 420 aaKnown RBP4.55□□□□□ -1.68
SYPL1-203ENST00000460770 CPLX3Q8WVH0 158 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 GPRASP2Q96D09 838 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 AP5M1Q9H0R1 490 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.55□□□□□ -1.683e-19■■■■■ 31.2
SYPL1-203ENST00000460770 EFR3BQ9Y2G0 817 aa4.55□□□□□ -1.68
SYPL1-203ENST00000460770 ANKRD34BA5PLL1 514 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 EPHX1P07099 455 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 CYP2C8P10632 490 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 ATF2P15336 505 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 PMLP29590 882 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 GIPRP48546 466 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 CACNB2Q08289 660 aaPredicted RBP4.54□□□□□ -1.68
SYPL1-203ENST00000460770 PAK2Q13177 524 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 RTP5Q14D33 572 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 PPP2R5EQ16537 467 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 DPY19L1Q2PZI1 675 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 VWA3BQ502W6 1294 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 LDLRAD1Q5T700 205 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 ZC3H18Q86VM9 953 aaKnown RBP4.54□□□□□ -1.68
SYPL1-203ENST00000460770 CARFQ8N187 725 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 ARHGEF39Q8N4T4 335 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 GPR20Q99678 358 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 SPATA25Q9BR10 227 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 GINM1Q9NU53 330 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 CGGBP1Q9UFW8 167 aaPredicted RBP4.54□□□□□ -1.68
SYPL1-203ENST00000460770 JAG2Q9Y219 1238 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 RWDD3Q9Y3V2 267 aa4.54□□□□□ -1.68
SYPL1-203ENST00000460770 LTBP3Q9NS15 1303 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 A0A1W2PQH9 124 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 NOP56O00567 594 aaKnown RBP4.53□□□□□ -1.68
SYPL1-203ENST00000460770 SARSP49591 514 aaKnown RBP4.53□□□□□ -1.68
SYPL1-203ENST00000460770 ZNF143P52747 638 aaPredicted RBP4.53□□□□□ -1.68
SYPL1-203ENST00000460770 ZXDCQ2QGD7 858 aaPredicted RBP4.53□□□□□ -1.68
SYPL1-203ENST00000460770 IQCEQ6IPM2 695 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 CCDC81Q6ZN84 652 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 SMARCC2Q8TAQ2 1214 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 RASGRP4Q8TDF6 673 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 DDX11Q96FC9 970 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 APBA2Q99767 749 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 NGRNQ9NPE2 291 aaKnown RBP4.53□□□□□ -1.68
SYPL1-203ENST00000460770 STRIP2Q9ULQ0 834 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 AKT3Q9Y243 479 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 HCFC2Q9Y5Z7 792 aa4.53□□□□□ -1.68
SYPL1-203ENST00000460770 PLA2G1BP04054 148 aaKnown RBP4.52□□□□□ -1.69
SYPL1-203ENST00000460770 CASP7P55210 303 aa4.52□□□□□ -1.69
SYPL1-203ENST00000460770 RACK1P63244 317 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms