RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 TAOK3Q9H2K8 898 aa6.91□□□□□ -1.3
PTPN12-209ENST00000460731 FAM13BQ9NYF5 915 aa6.91□□□□□ -1.3
PTPN12-209ENST00000460731 DBNLQ9UJU6 430 aaKnown RBP6.91□□□□□ -1.3
PTPN12-209ENST00000460731 ANGEL1Q9UNK9 670 aaKnown RBP6.91□□□□□ -1.3
PTPN12-209ENST00000460731 PDS5AQ29RF7 1337 aaKnown RBP6.91□□□□□ -1.3
PTPN12-209ENST00000460731 ZNF609O15014 1411 aa6.91□□□□□ -1.3
PTPN12-209ENST00000460731 CHD4Q14839 1912 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 UFL1O94874 794 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 IFIT1P09914 478 aaKnown RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 LMNB1P20700 586 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 KLRK1P26718 216 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 HIBADHP31937 336 aaKnown RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 SGO2Q562F6 1265 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 CHD1LQ86WJ1 897 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 TICAM2Q86XR7 235 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 EYA3Q99504 573 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 ZC3H12CQ9C0D7 883 aaKnown RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 CD209Q9NNX6 404 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 ABI2Q9NYB9 513 aaPredicted RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
PTPN12-209ENST00000460731 FAM205AQ6ZU69 1335 aa6.9□□□□□ -1.3
PTPN12-209ENST00000460731 COL4A5P29400 1685 aa6.9□□□□□ -1.31
PTPN12-209ENST00000460731 CACNA1SQ13698 1873 aa6.9□□□□□ -1.31
PTPN12-209ENST00000460731 DICER1Q9UPY3 1922 aaKnown RBP6.89□□□□□ -1.31
PTPN12-209ENST00000460731 TIAF1O95411 115 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 VIL1P09327 827 aaKnown RBP6.89□□□□□ -1.31
PTPN12-209ENST00000460731 SLC5A1P13866 664 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 JUNBP17275 347 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ATP5JP18859 108 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ADORA1P30542 326 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 MMP14P50281 582 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 FKBP1AP62942 108 aaKnown RBP6.89□□□□□ -1.31
PTPN12-209ENST00000460731 GPR162Q16538 588 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ANKRD45Q5TZF3 282 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 FDX2Q6P4F2 183 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ARHGAP27Q6ZUM4 889 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 C16orf71Q8IYS4 520 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-209ENST00000460731 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 CCDC136Q96JN2 1154 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 GMLQ99445 158 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 SUGCTQ9HAC7 445 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 IL1RAPL2Q9NP60 686 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ZNF277Q9NRM2 450 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ZNRF3Q9ULT6 936 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 SALL1Q9NSC2 1324 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 SPEF2Q9C093 1822 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 AKAP11Q9UKA4 1901 aa6.89□□□□□ -1.31
PTPN12-209ENST00000460731 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 AOX1Q06278 1338 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 TTC41PQ6P2S7 1318 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 YDJCA8MPS7 323 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 SMARCA5O60264 1052 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-209ENST00000460731 UQCRFS1P1P0C7P4 283 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 ZAP70P43403 619 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 PHKA1P46020 1223 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 GYG1P46976 350 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 PDE1AP54750 535 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 OS9Q13438 667 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-209ENST00000460731 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 CAVIN4Q5BKX8 364 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 TMED8Q6PL24 325 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-209ENST00000460731 AACSQ86V21 672 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 PI4K2BQ8TCG2 481 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 PRIMPOLQ96LW4 560 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 TMPRSS13Q9BYE2 586 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 ECHDC1Q9NTX5 307 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 SUGT1Q9Y2Z0 365 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 SCN9AQ15858 1988 aa6.88□□□□□ -1.31
PTPN12-209ENST00000460731 PPIP5K2O43314 1243 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 KCNJ4P48050 445 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 NLRP12P59046 1061 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 CXCL9Q07325 125 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 RASGRF1Q13972 1273 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 AOC3Q16853 763 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 CCDC158Q5M9N0 1113 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 B4GALNT3Q6L9W6 998 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 ZNF804AQ7Z570 1209 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 SMG8Q8ND04 991 aaKnown RBP6.87□□□□□ -1.31
PTPN12-209ENST00000460731 OTUD7AQ8TE49 926 aaPredicted RBP6.87□□□□□ -1.31
PTPN12-209ENST00000460731 CALR3Q96L12 384 aaKnown RBP6.87□□□□□ -1.31
PTPN12-209ENST00000460731 GPR101Q96P66 508 aaPredicted RBP6.87□□□□□ -1.31
PTPN12-209ENST00000460731 HAUS7Q99871 368 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 CCDC8Q9H0W5 538 aaPredicted RBP6.87□□□□□ -1.31
PTPN12-209ENST00000460731 KCNQ5Q9NR82 932 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 GNL3LQ9NVN8 582 aaKnown RBP6.87□□□□□ -1.31
PTPN12-209ENST00000460731 HMG20BQ9P0W2 317 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 SALL4Q9UJQ4 1053 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 SOX13Q9UN79 622 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 CCDC88AQ3V6T2 1871 aa6.87□□□□□ -1.31
PTPN12-209ENST00000460731 ZNF646O15015 1829 aaPredicted RBP6.86□□□□□ -1.31
PTPN12-209ENST00000460731 PSME4Q14997 1843 aa6.86□□□□□ -1.31
PTPN12-209ENST00000460731 GAS2O43903 313 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms