RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 ERCC3P19447 782 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 SCTRP47872 440 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 PRR20EP86478 221 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 PRR20CP86479 221 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 PRR20DP86480 221 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 PRR20BP86481 221 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 PRR20AP86496 221 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 ICA1Q05084 483 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 PLS1Q14651 629 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 COG2Q14746 738 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
HMGN2-202ENST00000460563 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 VRTNQ9H8Y1 702 aa13.04□□□□□ -0.32
HMGN2-202ENST00000460563 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
HMGN2-202ENST00000460563 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
HMGN2-202ENST00000460563 HMMRO75330 724 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 FLOT1O75955 427 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 NNTQ13423 1086 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
HMGN2-202ENST00000460563 PPP1R26Q5T8A7 1209 aaPredicted RBP13.03□□□□□ -0.32
HMGN2-202ENST00000460563 DPP9Q86TI2 863 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 CYP4X1Q8N118 509 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 DEFB123Q8N688 67 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 LPAR1Q92633 364 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 HAUS7Q99871 368 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 SWAP70Q9UH65 585 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
HMGN2-202ENST00000460563 TTC24A2A3L6 582 aaPredicted RBP13.02□□□□□ -0.33
HMGN2-202ENST00000460563 USP17L12C9JPN9 530 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 USP17L21D6R901 530 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 RAB11FIP3O75154 756 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 ATP5JP18859 108 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 CDK8P49336 464 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 RTP1P59025 263 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 C20orf194Q5TEA3 1177 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 C12orf60Q5U649 245 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 NCAPG2Q86XI2 1143 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 VCPKMTQ9H867 229 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 ARHGEF10LQ9HCE6 1279 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 TMX2Q9Y320 296 aa13.02□□□□□ -0.33
HMGN2-202ENST00000460563 MCM3APO60318 1980 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 DNM1LO00429 736 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 SMPD1P17405 629 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
HMGN2-202ENST00000460563 TMEM132BQ14DG7 1078 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 CRTC2Q53ET0 693 aaPredicted RBP13.01□□□□□ -0.33
HMGN2-202ENST00000460563 OLFML2BQ68BL8 750 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 PUS7LQ9H0K6 701 aaKnown RBP13.01□□□□□ -0.33
HMGN2-202ENST00000460563 ATP8A2Q9NTI2 1148 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 WASF2Q9Y6W5 498 aa13.01□□□□□ -0.33
HMGN2-202ENST00000460563 EYSQ5T1H1 3165 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
HMGN2-202ENST00000460563 MSCO60682 206 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
HMGN2-202ENST00000460563 CLDN10P78369 228 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 TSHZ3Q63HK5 1081 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 MB21D1Q8N884 522 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 MAML3Q96JK9 1138 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 DDX24Q9GZR7 859 aaKnown RBP eCLIP13□□□□□ -0.335e-18■■□□□ 11.9
HMGN2-202ENST00000460563 CYLDQ9NQC7 956 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 MTMR10Q9NXD2 777 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 NOD1Q9Y239 953 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 ATP11BQ9Y2G3 1177 aa13□□□□□ -0.33
HMGN2-202ENST00000460563 CDH23Q9H251 3354 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 SEPT4O43236 478 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 STRNO43815 780 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 LILRA1O75019 489 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 ATG7O95352 703 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 PGK2P07205 417 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
HMGN2-202ENST00000460563 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 DLL1O00548 723 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 USP4Q13107 963 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 LENG1Q96BZ8 264 aaPredicted RBP12.98□□□□□ -0.33
HMGN2-202ENST00000460563 CCDC17Q96LX7 622 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 MMP19Q99542 508 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
HMGN2-202ENST00000460563 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
HMGN2-202ENST00000460563 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
HMGN2-202ENST00000460563 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 MROH8Q9H579 483 aa12.98□□□□□ -0.33
HMGN2-202ENST00000460563 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms