RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 IQSEC1Q6DN90 963 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 EEPD1Q7L9B9 569 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 FBXO16Q8IX29 292 aaPredicted RBP16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 SSH1Q8WYL5 1049 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 RMDN1Q96DB5 314 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 POLR3EQ9NVU0 708 aa16.34■□□□□ 0.21
PCOLCE-202ENST00000460002 ABHD14A-ACY1A0A1B0GW23 586 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 TBX10O75333 385 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 MYL3P08590 195 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 CCDC158Q5M9N0 1113 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 DGLUCYQ7Z3D6 616 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 MEIS3Q99687 375 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 MTG1Q9BT17 334 aaPredicted RBP16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 SWAP70Q9UH65 585 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 FBXO40Q9UH90 709 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 INSL6Q9Y581 213 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 BAHCC1Q9P281 2608 aa16.33■□□□□ 0.2
PCOLCE-202ENST00000460002 ASB14A6NK59 587 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 NCK2O43639 380 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 NBNO60934 754 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 CXCL10P02778 98 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 NUBP1P53384 320 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 HYAL1Q12794 435 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 FRMD5Q7Z6J6 570 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 NAV1Q8NEY1 1877 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 AFAP1L1Q8TED9 768 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 VPS13AQ96RL7 3174 aa16.32■□□□□ 0.2
PCOLCE-202ENST00000460002 PDGFBP01127 241 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 MTX1Q13505 466 aa16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 HDAC5Q9UQL6 1122 aa16.31■□□□□ 0.2
PCOLCE-202ENST00000460002 ZBED4O75132 1171 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 CBX2Q14781 532 aaPredicted RBP16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 SAMD11Q96NU1 681 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 A1CFQ9NQ94 594 aaKnown RBP16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 CD207Q9UJ71 328 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
PCOLCE-202ENST00000460002 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 LINC01565O15544 149 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 SELPP16109 830 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 GTF2F1P35269 517 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 PTPN11Q06124 597 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 DUSP28Q4G0W2 176 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 CAGE1Q8TC20 777 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 SDR42E1Q8WUS8 393 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 ANTXR1Q9H6X2 564 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 TPRP12270 2363 aaKnown RBP16.29■□□□□ 0.2
PCOLCE-202ENST00000460002 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 USP17L21D6R901 530 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 EFCAB14O75071 495 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 CPT1AP50416 773 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 IKBKEQ14164 716 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 FBXO11Q86XK2 927 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 TMEM192Q8IY95 271 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 KIFC2Q96AC6 838 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 CTDP1Q9Y5B0 961 aaPredicted RBP16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 DMXL1Q9Y485 3027 aa16.28■□□□□ 0.2
PCOLCE-202ENST00000460002 MYO7AQ13402 2215 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 EYA4O95677 639 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 CDK8P49336 464 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 PTGISQ16647 500 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 MSLNLQ96KJ4 702 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 CRNKL1Q9BZJ0 848 aaKnown RBP16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 VTA1Q9NP79 307 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 COG6Q9Y2V7 657 aa16.27■□□□□ 0.2
PCOLCE-202ENST00000460002 NDUFB10O96000 172 aa16.26■□□□□ 0.19
PCOLCE-202ENST00000460002 MYOCDQ8IZQ8 938 aa16.26■□□□□ 0.19
PCOLCE-202ENST00000460002 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCOLCE-202ENST00000460002 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
PCOLCE-202ENST00000460002 CFAP47Q6ZTR5 3102 aa16.25■□□□□ 0.19
PCOLCE-202ENST00000460002 ATG2AQ2TAZ0 1938 aa16.25■□□□□ 0.19
PCOLCE-202ENST00000460002 F5H6K3 240 aa16.25■□□□□ 0.19
PCOLCE-202ENST00000460002 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
PCOLCE-202ENST00000460002 CKBP12277 381 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms