RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 IWS1Q96ST2 819 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 ZKSCAN3Q9BRR0 538 aa11.68□□□□□ -0.54
HDLBP-228ENST00000459788 MRPL11Q9Y3B7 192 aaKnown RBP11.68□□□□□ -0.54
HDLBP-228ENST00000459788 PTPDC1A2A3K4 754 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 ARVCFO00192 962 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 TLR3O15455 904 aaKnown RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 KPNA6O60684 536 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 SNAP25P60880 206 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 CDC37Q16543 378 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 FSCN1Q16658 493 aaKnown RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 TLK2Q86UE8 772 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 LENG1Q96BZ8 264 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-228ENST00000459788 IL25Q9H293 177 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
HDLBP-228ENST00000459788 LAMA2P24043 3122 aaKnown RBP11.66□□□□□ -0.54
HDLBP-228ENST00000459788 TRIM43BA6NCK2 446 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 PALM3A6NDB9 673 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-228ENST00000459788 E7EWF7 191 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 SOX1O00570 391 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-228ENST00000459788 RAG1P15918 1043 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 SMPD1P17405 629 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 CPT1AP50416 773 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 PTH1RQ03431 593 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 PDE4DQ08499 809 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 FAAP100Q0VG06 881 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 KIAA1211Q6ZU35 1233 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 FBXO11Q86XK2 927 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 TMTC2Q8N394 836 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 NSUN6Q8TEA1 469 aaKnown RBP11.66□□□□□ -0.54
HDLBP-228ENST00000459788 TRIM43Q96BQ3 446 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-228ENST00000459788 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 AMNQ9BXJ7 453 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 JMJD4Q9H9V9 463 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-228ENST00000459788 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 TBX21Q9UL17 535 aa11.66□□□□□ -0.54
HDLBP-228ENST00000459788 MYADML2A6NDP7 307 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 KLRF2D3W0D1 207 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
HDLBP-228ENST00000459788 ZBTB5O15062 677 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 PQBP1O60828 265 aaKnown RBP11.65□□□□□ -0.54
HDLBP-228ENST00000459788 TIMP1P01033 207 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 GOLGA8HP0CJ92 632 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 CALML3P27482 149 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 GRM4Q14833 912 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 WTAPQ15007 396 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 QRICH1Q2TAL8 776 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 SLC30A10Q6XR72 485 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
HDLBP-228ENST00000459788 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 FBXO16Q8IX29 292 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-228ENST00000459788 FAM126BQ8IXS8 530 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 BADQ92934 168 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 UBA5Q9GZZ9 404 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 RIOX1Q9H6W3 641 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 MAD2L2Q9UI95 211 aa11.65□□□□□ -0.54
HDLBP-228ENST00000459788 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-228ENST00000459788 A6NJR5 290 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 DYNC1LI2O43237 492 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-228ENST00000459788 CD4P01730 458 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 HSD17B4P51659 736 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 IRX6P78412 446 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-228ENST00000459788 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
HDLBP-228ENST00000459788 FPGSQ05932 587 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 TROAPQ12815 778 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 USH1GQ495M9 461 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-228ENST00000459788 SYTL5Q8TDW5 730 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-228ENST00000459788 VTI1AQ96AJ9 217 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 PDGFCQ9NRA1 345 aa11.64□□□□□ -0.55
HDLBP-228ENST00000459788 MYO9BQ13459 2157 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
HDLBP-228ENST00000459788 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
HDLBP-228ENST00000459788 DDAH1O94760 285 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 KIF5BP33176 963 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 MCM5P33992 734 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 LIFRP42702 1097 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-228ENST00000459788 PPIGQ13427 754 aaKnown RBP eCLIP11.63□□□□□ -0.556e-20■□□□□ 10.5
HDLBP-228ENST00000459788 ITGA7Q13683 1181 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 STXBP2Q15833 593 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms