RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 GBF1Q92538 1859 aa31.09■■■□□ 2.57
PBRM1-218ENST00000458294 ANKRD45Q5TZF3 282 aa31.08■■■□□ 2.57
PBRM1-218ENST00000458294 OTOP2Q7RTS6 562 aa31.08■■■□□ 2.57
PBRM1-218ENST00000458294 TICAM2Q86XR7 235 aa31.08■■■□□ 2.57
PBRM1-218ENST00000458294 RPUSD2Q8IZ73 545 aaKnown RBP31.08■■■□□ 2.57
PBRM1-218ENST00000458294 WNT8AQ9H1J5 351 aa31.08■■■□□ 2.57
PBRM1-218ENST00000458294 POLR3EQ9NVU0 708 aa31.08■■■□□ 2.57
PBRM1-218ENST00000458294 CHD9Q3L8U1 2897 aa31.08■■■□□ 2.57
PBRM1-218ENST00000458294 NFIBO00712 420 aa31.07■■■□□ 2.56
PBRM1-218ENST00000458294 FGAP02671 866 aa31.07■■■□□ 2.56
PBRM1-218ENST00000458294 RRP12Q5JTH9 1297 aaKnown RBP31.07■■■□□ 2.56
PBRM1-218ENST00000458294 WDR11Q9BZH6 1224 aa31.07■■■□□ 2.56
PBRM1-218ENST00000458294 ALDH8A1Q9H2A2 487 aaPredicted RBP31.07■■■□□ 2.56
PBRM1-218ENST00000458294 PRDM6Q9NQX0 595 aa31.07■■■□□ 2.56
PBRM1-218ENST00000458294 ZMYM6O95789 1325 aa31.06■■■□□ 2.56
PBRM1-218ENST00000458294 FRMPD2Q68DX3 1309 aaPredicted RBP31.06■■■□□ 2.56
PBRM1-218ENST00000458294 RBM47A0AV96 593 aaKnown RBP31.06■■■□□ 2.56
PBRM1-218ENST00000458294 CPT1AP50416 773 aa31.06■■■□□ 2.56
PBRM1-218ENST00000458294 MCMDC2Q4G0Z9 681 aa31.06■■■□□ 2.56
PBRM1-218ENST00000458294 SLC28A3Q9HAS3 691 aa31.06■■■□□ 2.56
PBRM1-218ENST00000458294 PTPDC1A2A3K4 754 aa31.05■■■□□ 2.56
PBRM1-218ENST00000458294 SUPT20HL2P0C7V6 817 aa31.05■■■□□ 2.56
PBRM1-218ENST00000458294 NKX2-4Q9H2Z4 354 aa31.05■■■□□ 2.56
PBRM1-218ENST00000458294 GPCPD1Q9NPB8 672 aa31.05■■■□□ 2.56
PBRM1-218ENST00000458294 PDHBP11177 359 aa31.04■■■□□ 2.56
PBRM1-218ENST00000458294 PDE1AP54750 535 aa31.04■■■□□ 2.56
PBRM1-218ENST00000458294 PURAQ00577 322 aaKnown RBP31.04■■■□□ 2.56
PBRM1-218ENST00000458294 ATXN2LQ8WWM7 1075 aaKnown RBP31.04■■■□□ 2.56
PBRM1-218ENST00000458294 PPM1EQ8WY54 764 aa31.04■■■□□ 2.56
PBRM1-218ENST00000458294 FAM227BQ96M60 508 aa31.04■■■□□ 2.56
PBRM1-218ENST00000458294 MPHOSPH6Q99547 160 aaKnown RBP31.04■■■□□ 2.56
PBRM1-218ENST00000458294 A0A0D9SFI3 127 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 PFKMP08237 780 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 ADGRE1Q14246 886 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 SLC30A10Q6XR72 485 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 RNF207Q6ZRF8 634 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 CLEC4DQ8WXI8 215 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 TTC14Q96N46 770 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 YBX2Q9Y2T7 364 aaKnown RBP31.03■■■□□ 2.56
PBRM1-218ENST00000458294 SLC4A7Q9Y6M7 1214 aa31.03■■■□□ 2.56
PBRM1-218ENST00000458294 HSPD1P10809 573 aaKnown RBP31.02■■■□□ 2.56
PBRM1-218ENST00000458294 PCP11498 1178 aaKnown RBP31.02■■■□□ 2.56
PBRM1-218ENST00000458294 CALML3P27482 149 aa31.02■■■□□ 2.56
PBRM1-218ENST00000458294 OR6J1Q8NGC5 347 aa31.02■■■□□ 2.56
PBRM1-218ENST00000458294 SCLYQ96I15 445 aa31.02■■■□□ 2.56
PBRM1-218ENST00000458294 MTG1Q9BT17 334 aaPredicted RBP31.02■■■□□ 2.56
PBRM1-218ENST00000458294 GPHNQ9NQX3 736 aaPredicted RBP31.02■■■□□ 2.56
PBRM1-218ENST00000458294 THEGQ9P2T0 379 aa31.02■■■□□ 2.56
PBRM1-218ENST00000458294 TNKSO95271 1327 aa31.01■■■□□ 2.56
PBRM1-218ENST00000458294 WDR19Q8NEZ3 1342 aa31.01■■■□□ 2.56
PBRM1-218ENST00000458294 NKRFO15226 690 aaKnown RBP eCLIP31.01■■■□□ 2.55
PBRM1-218ENST00000458294 BRDTQ58F21 947 aaPredicted RBP31.01■■■□□ 2.55
PBRM1-218ENST00000458294 TRMT13Q9NUP7 481 aaKnown RBP31.01■■■□□ 2.55
PBRM1-218ENST00000458294 RAD50Q92878 1312 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 MYL3P08590 195 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 PDE4DQ08499 809 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 ZNF543Q08ER8 600 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 DNERQ8NFT8 737 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 VWCEQ96DN2 955 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 PCDHA11Q9Y5I1 949 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 MUC3AQ02505 3323 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 TTC28Q96AY4 2481 aa31■■■□□ 2.55
PBRM1-218ENST00000458294 MYO9BQ13459 2157 aa30.99■■■□□ 2.55
PBRM1-218ENST00000458294 TNFRSF10AO00220 468 aa30.99■■■□□ 2.55
PBRM1-218ENST00000458294 SNHG28P0DPA3 235 aa30.99■■■□□ 2.55
PBRM1-218ENST00000458294 IGFBP4P22692 258 aa30.99■■■□□ 2.55
PBRM1-218ENST00000458294 EDNRBP24530 442 aa30.99■■■□□ 2.55
PBRM1-218ENST00000458294 RRP1P56182 461 aaKnown RBP30.99■■■□□ 2.55
PBRM1-218ENST00000458294 RPS6P62753 249 aaKnown RBP30.99■■■□□ 2.55
PBRM1-218ENST00000458294 PPP2R5BQ15173 497 aa30.99■■■□□ 2.55
PBRM1-218ENST00000458294 SCN10AQ9Y5Y9 1956 aa30.98■■■□□ 2.55
PBRM1-218ENST00000458294 ZBBXA8MT70 800 aa30.98■■■□□ 2.55
PBRM1-218ENST00000458294 CYP2C9P11712 490 aa30.98■■■□□ 2.55
PBRM1-218ENST00000458294 HDAC1Q13547 482 aaPredicted RBP30.98■■■□□ 2.55
PBRM1-218ENST00000458294 MFSD6Q6ZSS7 791 aa30.98■■■□□ 2.55
PBRM1-218ENST00000458294 ZNF589Q86UQ0 364 aaPredicted RBP30.98■■■□□ 2.55
PBRM1-218ENST00000458294 SCFD2Q8WU76 684 aa30.98■■■□□ 2.55
PBRM1-218ENST00000458294 CCDC171Q6TFL3 1326 aa30.98■■■□□ 2.55
PBRM1-218ENST00000458294 CHD7Q9P2D1 2997 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 B4DLN1 442 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 KPNA6O60684 536 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 MRPL12P52815 198 aaKnown RBP30.97■■■□□ 2.55
PBRM1-218ENST00000458294 RABGGTBP53611 331 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 HAND2P61296 217 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 PPP2R2DQ66LE6 453 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 ASB2Q96Q27 587 aa30.97■■■□□ 2.55
PBRM1-218ENST00000458294 ATP2A2P16615 1042 aaKnown RBP30.96■■■□□ 2.55
PBRM1-218ENST00000458294 NMIQ13287 307 aaPredicted RBP30.96■■■□□ 2.55
PBRM1-218ENST00000458294 GPATCH4Q5T3I0 446 aaKnown RBP30.96■■■□□ 2.55
PBRM1-218ENST00000458294 NFRKBQ6P4R8 1299 aa30.96■■■□□ 2.55
PBRM1-218ENST00000458294 RNF41Q9H4P4 317 aaPredicted RBP30.96■■■□□ 2.55
PBRM1-218ENST00000458294 A6NJR5 290 aa30.95■■■□□ 2.55
PBRM1-218ENST00000458294 RFC2P35250 354 aa30.95■■■□□ 2.55
PBRM1-218ENST00000458294 CCDC85BQ15834 202 aaPredicted RBP30.95■■■□□ 2.55
PBRM1-218ENST00000458294 NBPF20Q3BBV1 942 aa30.95■■■□□ 2.55
PBRM1-218ENST00000458294 FAM47CQ5HY64 1035 aa30.95■■■□□ 2.55
PBRM1-218ENST00000458294 NT5C2P49902 561 aa30.94■■■□□ 2.54
PBRM1-218ENST00000458294 MRPS5P82675 430 aaKnown RBP30.94■■■□□ 2.54
PBRM1-218ENST00000458294 PTPN11Q06124 597 aaPredicted RBP30.94■■■□□ 2.54
PBRM1-218ENST00000458294 TTLL4Q14679 1199 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms