RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 GADD45BO75293 160 aaPredicted RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 ICAM1P05362 532 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 CMA1P23946 247 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 PRPHP41219 470 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 ATP2C1P98194 919 aaPredicted RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 GHRHRQ02643 423 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 CEBPZQ03701 1054 aaKnown RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 FAM160A1Q05DH4 1040 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 USP17L24Q0WX57 530 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 PPIL2Q13356 520 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 ZYXQ15942 572 aaKnown RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 CCDC183Q5T5S1 534 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 LDLRAD1Q5T700 205 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 MOXD1Q6UVY6 613 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 NEK8Q86SG6 692 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 MRPS27Q92552 414 aaKnown RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 KIFC2Q96AC6 838 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 COA7Q96BR5 231 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 PYM1Q9BRP8 204 aaKnown RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 TANGO6Q9C0B7 1094 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 RPAP3Q9H6T3 665 aaPredicted RBP10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 EHMT1Q9H9B1 1298 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 SLC38A10Q9HBR0 1119 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 PCDHA7Q9UN72 937 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 KCNH4Q9UQ05 1017 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 RABGAP1Q9Y3P9 1069 aa10.16□□□□□ -0.78
CDC42EP3-204ENST00000457889 A0A0G2JLL6 359 aaPredicted RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 FAM237AA0A1B0GTK4 181 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 ATP2A1O14983 1001 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 CTAGE5O15320 804 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 ZBED4O75132 1171 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 FLOT1O75955 427 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 PTPREP23469 700 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 HMGCS2P54868 508 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 PABPC4Q13310 644 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 TTLL12Q14166 644 aaPredicted RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 COG2Q14746 738 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 TKFCQ3LXA3 575 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 AXDND1Q5T1B0 1012 aaPredicted RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 PPP4R3AQ6IN85 833 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 FASTKD5Q7L8L6 764 aaKnown RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 PRRT2Q7Z6L0 340 aaPredicted RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 MCF2L2Q86YR7 1114 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 MB21D1Q8N884 522 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 CCDC34Q96HJ3 373 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 PGBD1Q96JS3 809 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 FTOQ9C0B1 505 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 HOXC10Q9NYD6 342 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 PCDHB6Q9Y5E3 794 aa10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 SRPRBQ9Y5M8 271 aaKnown RBP10.15□□□□□ -0.78
CDC42EP3-204ENST00000457889 LOC285556D6RIA3 1793 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 KINO60870 393 aaKnown RBP10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 HOXA7P31268 230 aaPredicted RBP10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 USP11P51784 963 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZNF445P59923 1031 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 CATSPERGQ6ZRH7 1159 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 CCDC84Q86UT8 332 aaPredicted RBP10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 GTF3C2Q8WUA4 911 aaPredicted RBP10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 CCPG1Q9ULG6 757 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 ADAMTS5Q9UNA0 930 aa10.14□□□□□ -0.79
CDC42EP3-204ENST00000457889 PTPRFP10586 1907 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 GCOM1H8Y6P7 765 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 VWA5AO00534 786 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 MEIS2O14770 477 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 NEMFO60524 1076 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 POLR2MP0CAP2 368 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 COPB2P35606 906 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 LONP1P36776 959 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 SREBF1P36956 1147 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 PTGDRQ13258 359 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 SNAPC2Q13487 334 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 PRKG1Q13976 671 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 INF2Q27J81 1249 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZSCAN23Q3MJ62 389 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 USH1GQ495M9 461 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 RESP18Q5W5W9 173 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 LBX2Q6XYB7 198 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 CCAR1Q8IX12 1150 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 ELOA2Q8IYF1 753 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 C2orf69Q8N8R5 385 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 FSIP1Q8NA03 581 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 AK8Q96MA6 479 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 TIGD1Q96MW7 591 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 ANO3Q9BYT9 981 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 NUP62CLQ9H1M0 184 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 RRAGCQ9HB90 399 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 FBXO28Q9NVF7 368 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 BIN2Q9UBW5 565 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 FBXO2Q9UK22 296 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 SLC45A1Q9Y2W3 748 aa10.13□□□□□ -0.79
CDC42EP3-204ENST00000457889 UTRNP46939 3433 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms