RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CPLX3Q8WVH0 158 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 ARID3AQ99856 593 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 STK17AQ9UEE5 414 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 FAM198AQ9UFP1 575 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 MYH7BA7E2Y1 1941 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 ARFGEF1Q9Y6D6 1849 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 FANCGO15287 622 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 TXKP42681 527 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 TNNI2P48788 182 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 RBM5P52756 815 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC43-202ENST00000457422 PMS1P54277 932 aaKnown RBP18.72■□□□□ 0.59
CCDC43-202ENST00000457422 TMEM266Q2M3C6 531 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 SHROOM1Q2M3G4 852 aaPredicted RBP18.72■□□□□ 0.59
CCDC43-202ENST00000457422 TTI2Q6NXR4 508 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 CUL5Q93034 780 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 RAB34Q9BZG1 259 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 VPS16Q9H269 839 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 NYAP2Q9P242 653 aa18.72■□□□□ 0.59
CCDC43-202ENST00000457422 DDTLA6NHG4 134 aaPredicted RBP18.71■□□□□ 0.59
CCDC43-202ENST00000457422 CCDC175P0C221 793 aa18.71■□□□□ 0.59
CCDC43-202ENST00000457422 CHRNA5P30532 468 aa18.71■□□□□ 0.59
CCDC43-202ENST00000457422 FXR1P51114 621 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC43-202ENST00000457422 SRRTQ9BXP5 876 aaKnown RBP18.71■□□□□ 0.59
CCDC43-202ENST00000457422 EXOC1Q9NV70 894 aa18.71■□□□□ 0.59
CCDC43-202ENST00000457422 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
CCDC43-202ENST00000457422 LRWD1Q9UFC0 647 aa18.71■□□□□ 0.59
CCDC43-202ENST00000457422 SERPINA10Q9UK55 444 aa18.71■□□□□ 0.59
CCDC43-202ENST00000457422 SOWAHDA6NJG2 315 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 MRPL12P52815 198 aaKnown RBP18.7■□□□□ 0.58
CCDC43-202ENST00000457422 PDE4DQ08499 809 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 GRB10Q13322 594 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 MTF1Q14872 753 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 RAD9BQ6WBX8 426 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 SH3BP5LQ7L8J4 393 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 DCAF4Q8WV16 495 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 DESI2Q9BSY9 194 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 GLT8D2Q9H1C3 349 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 A0A1W2PQC6 194 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 CCNE1P24864 410 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 ASIC1P78348 528 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 TATDN1Q6P1N9 297 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 CREBRFQ8IUR6 639 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 KANSL2Q9H9L4 492 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 ADGRG1Q9Y653 693 aa18.7■□□□□ 0.58
CCDC43-202ENST00000457422 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 LGALS16A8MUM7 142 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 GCFC2P16383 781 aaKnown RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 CERKLQ49MI3 558 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 PNMA5Q96PV4 448 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 ABHD10Q9NUJ1 306 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 BLOC1S4Q9NUP1 217 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 V9GYY5 206 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 HOXA7P31268 230 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 AOC3Q16853 763 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 SV2BQ7L1I2 683 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 TMTC1Q8IUR5 882 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 ZNF507Q8TCN5 953 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 P2RX5Q93086 422 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 CNKSR1Q969H4 720 aa18.69■□□□□ 0.58
CCDC43-202ENST00000457422 DUSP9Q99956 384 aaKnown RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 COL2A1P02458 1487 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-202ENST00000457422 PSME4Q14997 1843 aa18.68■□□□□ 0.58
CCDC43-202ENST00000457422 RAD21O60216 631 aa18.68■□□□□ 0.58
CCDC43-202ENST00000457422 UBXN1Q04323 297 aa18.68■□□□□ 0.58
CCDC43-202ENST00000457422 STK4Q13043 487 aa18.68■□□□□ 0.58
CCDC43-202ENST00000457422 LARP4BQ92615 738 aaKnown RBP18.68■□□□□ 0.58
CCDC43-202ENST00000457422 NAP1L4Q99733 375 aaKnown RBP18.68■□□□□ 0.58
CCDC43-202ENST00000457422 MRPL44Q9H9J2 332 aaKnown RBP18.68■□□□□ 0.58
CCDC43-202ENST00000457422 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
CCDC43-202ENST00000457422 PVALEFA0A1B0GWK0 134 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 MB21D1Q8N884 522 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 C7orf43Q8WVR3 580 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 TRIM34Q9BYJ4 488 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 POTEMA6NI47 508 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 GNG11P61952 73 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 ELF2Q15723 593 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 GLIPR1L2Q4G1C9 344 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 TMEM119Q4V9L6 283 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 TMEM179Q6ZVK1 233 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 LRRN4CLQ8ND94 238 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 ZNF397Q8NF99 534 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-202ENST00000457422 KIFC2Q96AC6 838 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 WDR24Q96S15 920 aa18.67■□□□□ 0.58
CCDC43-202ENST00000457422 MAGEC2Q9UBF1 373 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-202ENST00000457422 DDX25Q9UHL0 483 aaKnown RBP18.67■□□□□ 0.58
CCDC43-202ENST00000457422 CASQ1P31415 396 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 SLC1A4P43007 532 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 SEPT2Q15019 361 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 QRICH1Q2TAL8 776 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 SLFN13Q68D06 897 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms