RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
DDX39B-213ENST00000456976 FGD4Q96M96 766 aa14.36□□□□□ -0.11
DDX39B-213ENST00000456976 MTG1Q9BT17 334 aaPredicted RBP14.36□□□□□ -0.11
DDX39B-213ENST00000456976 GPR108Q9NPR9 543 aa14.36□□□□□ -0.11
DDX39B-213ENST00000456976 SWAP70Q9UH65 585 aa14.36□□□□□ -0.11
DDX39B-213ENST00000456976 ZFHX4Q86UP3 3567 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 USP17L12C9JPN9 530 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 USP17L21D6R901 530 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 MYL3P08590 195 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 RARSP54136 660 aaKnown RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 PTPN11Q06124 597 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 CTC1Q2NKJ3 1217 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 NFRKBQ6P4R8 1299 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 PRPF38AQ8NAV1 312 aaKnown RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 AFAP1L1Q8TED9 768 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 ZNF512BQ96KM6 892 aaPredicted RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 MCM9Q9NXL9 1143 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 CD207Q9UJ71 328 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 DBNLQ9UJU6 430 aaKnown RBP14.35□□□□□ -0.11
DDX39B-213ENST00000456976 FAM186AA6NE01 2351 aa14.35□□□□□ -0.11
DDX39B-213ENST00000456976 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 CPT1AP50416 773 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
DDX39B-213ENST00000456976 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 ARHGAP45Q92619 1136 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 RMDN1Q96DB5 314 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 ASIC4Q96FT7 647 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 ANTXR1Q9H6X2 564 aa14.34□□□□□ -0.11
DDX39B-213ENST00000456976 LOC730098B7Z3J9 87 aa14.33□□□□□ -0.12
DDX39B-213ENST00000456976 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
DDX39B-213ENST00000456976 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 PUM1Q14671 1186 aaKnown RBP eCLIP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
DDX39B-213ENST00000456976 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.12
DDX39B-213ENST00000456976 RIOK1Q9BRS2 568 aaKnown RBP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 CCDC8Q9H0W5 538 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
DDX39B-213ENST00000456976 KMT2BQ9UMN6 2715 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-213ENST00000456976 PARP14Q460N5 1801 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 KPNA6O60684 536 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 TRIM27P14373 513 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 AKR1B1P15121 316 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 SELPP16109 830 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 PTGS1P23219 599 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 DLX2Q07687 328 aaPredicted RBP14.32□□□□□ -0.12
DDX39B-213ENST00000456976 POLA2Q14181 598 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
DDX39B-213ENST00000456976 PDGFCQ9NRA1 345 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 COG6Q9Y2V7 657 aa14.32□□□□□ -0.12
DDX39B-213ENST00000456976 CXCL10P02778 98 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 AMHP03971 560 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 CYP2D6P10635 497 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 CBX2Q14781 532 aaPredicted RBP14.31□□□□□ -0.12
DDX39B-213ENST00000456976 TAPT1Q6NXT6 567 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 TMEM192Q8IY95 271 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 RIPOR3Q96MK2 946 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 VPS13AQ96RL7 3174 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
DDX39B-213ENST00000456976 SCN5AQ14524 2016 aa14.31□□□□□ -0.12
DDX39B-213ENST00000456976 CHD8Q9HCK8 2581 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
DDX39B-213ENST00000456976 BCAR3O75815 825 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 HTRA4P83105 476 aaPredicted RBP14.3□□□□□ -0.12
DDX39B-213ENST00000456976 HYAL1Q12794 435 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 GPNMBQ14956 572 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 PTGISQ16647 500 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 DUSP28Q4G0W2 176 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 LRRC8DQ7L1W4 858 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 EAF2Q96CJ1 260 aaPredicted RBP14.3□□□□□ -0.12
DDX39B-213ENST00000456976 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
DDX39B-213ENST00000456976 IGFLR1Q9H665 355 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 VTA1Q9NP79 307 aa14.3□□□□□ -0.12
DDX39B-213ENST00000456976 PLXNA3P51805 1871 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 EYA4O95677 639 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 OAZ1P54368 228 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 FBXO11Q86XK2 927 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 FBXO16Q8IX29 292 aaPredicted RBP14.29□□□□□ -0.12
DDX39B-213ENST00000456976 MYOCDQ8IZQ8 938 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
DDX39B-213ENST00000456976 SDR42E1Q8WUS8 393 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 YME1L1Q96TA2 773 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 ACAD9Q9H845 621 aa14.29□□□□□ -0.12
DDX39B-213ENST00000456976 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms