RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 RAD23BP54727 409 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ARHGAP4P98171 946 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CYLC2Q14093 348 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MPRIPQ6WCQ1 1025 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 IFNL2Q8IZJ0 200 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MYOCDQ8IZQ8 938 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MMGT1Q8N4V1 131 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 GABPB2Q8TAK5 448 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 AK8Q96MA6 479 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 WDR24Q96S15 920 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 IMPG2Q9BZV3 1241 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ECT2Q9H8V3 914 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 GPR108Q9NPR9 543 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 RAB21Q9UL25 225 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 WDR19Q8NEZ3 1342 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 KDM3AQ9Y4C1 1321 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 POLR1AO95602 1720 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 FAM187AA6NFU0 413 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 B4E1Z4 1266 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 GPAA1O43292 621 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 N4BP1O75113 896 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CPP00450 1065 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PCYT1AP49585 367 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 NT5C2P49902 561 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 AP2B1P63010 937 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 RASSF7Q02833 373 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 KPNB1Q14974 876 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 NONOQ15233 471 aaKnown RBP eCLIP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PTGISQ16647 500 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 TSGA10IPQ3SY00 556 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 TCP11X2Q5H9J9 407 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 DCAF17Q5H9S7 520 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 NUGGCQ68CJ6 796 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PPP1R2P3Q6NXS1 205 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 COPS6Q7L5N1 327 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MB21D1Q8N884 522 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CATSPER1Q8NEC5 780 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 USP6NLQ92738 828 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ZNF653Q96CK0 615 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CNOT6LQ96LI5 555 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 SERPINI1Q99574 410 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PITPNM3Q9BZ71 974 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 VPS37BQ9H9H4 285 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 A1CFQ9NQ94 594 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MAPK8IP1Q9UQF2 711 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MAGEB6P1A0A0J9YX57 407 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CCT8L1PA6NM43 557 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ENO4A6NNW6 628 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 LGALS16A8MUM7 142 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 SPECC1L-ADORA2AF8WAN1 911 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 HGSO14964 777 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 BUB1O43683 1085 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 SERPINB6P35237 376 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 SPARCL1Q14515 664 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PIK3AP1Q6ZUJ8 805 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PACS2Q86VP3 889 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ENAHQ8N8S7 591 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 P2RX5Q93086 422 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 FUCA2Q9BTY2 467 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 KDM4CQ9H3R0 1056 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 NOD2Q9HC29 1040 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 HAUS2Q9NVX0 235 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 LRWD1Q9UFC0 647 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ABCC12Q96J65 1359 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PSMD14O00487 310 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 DIAPH2O60879 1101 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ZRANB2O95218 330 aaKnown RBP eCLIP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 AGTP01019 485 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 HARSP12081 509 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CCNE1P24864 410 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PAPOLAP51003 745 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 KIF11P52732 1056 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PREPLQ4J6C6 727 aaPredicted RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 RSRC2Q7L4I2 434 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MAP7D3Q8IWC1 876 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 MIEF2Q96C03 454 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 NUDCD1Q96RS6 583 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 AATFQ9NY61 560 aaKnown RBP eCLIP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 CD2APQ9Y5K6 639 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 SH3TC1Q8TE82 1336 aa5.45□□□□□ -1.54
PCDH9-203ENST00000456367 ATXN2Q99700 1313 aaKnown RBP5.45□□□□□ -1.54
PCDH9-203ENST00000456367 PLCH2O75038 1416 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 IPO5O00410 1097 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TSPY3P0CV98 308 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 TSPY8P0CW00 308 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ADCY8P40145 1251 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MRPL12P52815 198 aaKnown RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 LAMB3Q13751 1172 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ITIH4Q14624 930 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 KRT31Q15323 416 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 DIXDC1Q155Q3 683 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 UAP1Q16222 522 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 KRT24Q2M2I5 525 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 NAA35Q5VZE5 725 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 ANO5Q75V66 913 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MCF2L2Q86YR7 1114 aa5.44□□□□□ -1.54
PCDH9-203ENST00000456367 SYT2Q8N9I0 419 aaPredicted RBP5.44□□□□□ -1.54
PCDH9-203ENST00000456367 MAGOHBQ96A72 148 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms