RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 REPS2Q8NFH8 660 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
ERCC3-204ENST00000456257 HAS1Q92839 578 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 DCPSQ96C86 337 aaKnown RBP8.5□□□□□ -1.05
ERCC3-204ENST00000456257 FAM20AQ96MK3 541 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 CUEDC2Q9H467 287 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 TAF1DQ9H5J8 278 aaPredicted RBP8.5□□□□□ -1.05
ERCC3-204ENST00000456257 KCNMB3Q9NPA1 279 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 PPP1R9AQ9ULJ8 1098 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 PCDHA5Q9Y5H7 936 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 ABCB11O95342 1321 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L15C9J2P7 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L13C9JLJ4 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L11C9JVI0 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L18D6R9N7 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L22D6RA61 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L17D6RBQ6 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L19D6RCP7 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L20D6RJB6 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 CXCL11O14625 94 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 NEMFO60524 1076 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 VCAM1P19320 739 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
ERCC3-204ENST00000456257 EPHX2P34913 555 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 OAZ1P54368 228 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 NLRP12P59046 1061 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L24Q0WX57 530 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 STX1AQ16623 288 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 PDXDC2PQ6P474 469 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 USP17L6PQ6QN14 398 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 CATSPERGQ6ZRH7 1159 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 CNNM3Q8NE01 707 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 ZKSCAN4Q969J2 545 aaPredicted RBP8.49□□□□□ -1.05
ERCC3-204ENST00000456257 LENG9Q96B70 501 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 PAGE5Q96GU1 130 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 GSDMAQ96QA5 445 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 WRNIP1Q96S55 665 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 MTRQ99707 1265 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 SLF1Q9BQI6 1058 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 MMTAG2Q9BU76 263 aaKnown RBP8.49□□□□□ -1.05
ERCC3-204ENST00000456257 PANK2Q9BZ23 570 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 CBX8Q9HC52 389 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 PICK1Q9NRD5 415 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 FBXO28Q9NVF7 368 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 KBTBD4Q9NVX7 518 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.49□□□□□ -1.05
ERCC3-204ENST00000456257 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 HOOK1Q9UJC3 728 aaKnown RBP8.49□□□□□ -1.05
ERCC3-204ENST00000456257 SCAF8Q9UPN6 1271 aaKnown RBP8.49□□□□□ -1.05
ERCC3-204ENST00000456257 SNCAIPQ9Y6H5 919 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 FRMPD4Q14CM0 1322 aa8.49□□□□□ -1.05
ERCC3-204ENST00000456257 VWA3AA6NCI4 1184 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 GCOM1H8Y6P7 765 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-204ENST00000456257 VWA5AO00534 786 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 IKBKBO14920 756 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 SLC37A4O43826 429 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 PPP1R12BO60237 982 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-204ENST00000456257 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
ERCC3-204ENST00000456257 POLR2MP0CAP2 368 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 BCRP11274 1271 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 BMP6P22004 513 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 ZNF165P49910 485 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 ARHGAP4P98171 946 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 DPYDQ12882 1025 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 MORC3Q14149 939 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 COG2Q14746 738 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 POSTNQ15063 836 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 UBE2SQ16763 222 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 LETM2Q2VYF4 491 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 HS1BP3Q53T59 392 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 SPECC1Q5M775 1068 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 PRAMEF18Q5VWM3 479 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 SARM1Q6SZW1 724 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 CHRDL2Q6WN34 429 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 LBX2Q6XYB7 198 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
ERCC3-204ENST00000456257 NIPA1Q7RTP0 329 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 KRT26Q7Z3Y9 468 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 CCDC84Q86UT8 332 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-204ENST00000456257 PNMA8AQ86V59 439 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-204ENST00000456257 MLKLQ8NB16 471 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 ETNPPLQ8TBG4 499 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 ANO3Q9BYT9 981 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 MAGEF1Q9HAY2 307 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 HOXC10Q9NYD6 342 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 KCNH4Q9UQ05 1017 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 RABGAP1Q9Y3P9 1069 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 ZHX2Q9Y6X8 837 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 RPTORQ8N122 1335 aa8.48□□□□□ -1.05
ERCC3-204ENST00000456257 IGLV3-22A0A075B6J6 115 aa8.47□□□□□ -1.05
ERCC3-204ENST00000456257 IQCA1LA6NCM1 817 aa8.47□□□□□ -1.05
ERCC3-204ENST00000456257 MEIS1O00470 390 aa8.47□□□□□ -1.05
ERCC3-204ENST00000456257 IRF6O14896 467 aa8.47□□□□□ -1.05
ERCC3-204ENST00000456257 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
ERCC3-204ENST00000456257 TDP2O95551 362 aa8.47□□□□□ -1.05
ERCC3-204ENST00000456257 SNAP25P60880 206 aa8.47□□□□□ -1.05
ERCC3-204ENST00000456257 PPATQ06203 517 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms