RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 SLC30A10Q6XR72 485 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 SMC5Q8IY18 1101 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 TIFAQ96CG3 184 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 TTC14Q96N46 770 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 ADD3Q9UEY8 706 aaKnown RBP22.05■■□□□ 1.12
COL20A1-204ENST00000455906 LAMA4Q16363 1823 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 MYO9BQ13459 2157 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 CHD7Q9P2D1 2997 aa22.05■■□□□ 1.12
COL20A1-204ENST00000455906 LOC102724159A0A0B4J2E5 919 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 GRXCR1A8MXD5 290 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 PCP11498 1178 aaKnown RBP22.04■■□□□ 1.12
COL20A1-204ENST00000455906 PBX2P40425 430 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 PSMC6P62333 389 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 PWP2Q15269 919 aaKnown RBP22.04■■□□□ 1.12
COL20A1-204ENST00000455906 MFSD6Q6ZSS7 791 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 RILPL2Q969X0 211 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 PBX4Q9BYU1 374 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 TRPV6Q9H1D0 765 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 HIPK3Q9H422 1215 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 ZNF576Q9H609 170 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 IL23AQ9NPF7 189 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 TTC28Q96AY4 2481 aa22.04■■□□□ 1.12
COL20A1-204ENST00000455906 RBM47A0AV96 593 aaKnown RBP22.03■■□□□ 1.12
COL20A1-204ENST00000455906 PTPDC1A2A3K4 754 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 B4GALT4O60513 344 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 SDSP20132 328 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 SEZ6LQ9BYH1 1024 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 MUC3AQ02505 3323 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 NEDD4P46934 1319 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 WDR19Q8NEZ3 1342 aa22.03■■□□□ 1.12
COL20A1-204ENST00000455906 B4GALNT3Q6L9W6 998 aa22.02■■□□□ 1.12
COL20A1-204ENST00000455906 HERVK_113Q902F9 699 aa22.02■■□□□ 1.12
COL20A1-204ENST00000455906 NOC4LQ9BVI4 516 aaKnown RBP22.02■■□□□ 1.12
COL20A1-204ENST00000455906 WDR11Q9BZH6 1224 aa22.02■■□□□ 1.12
COL20A1-204ENST00000455906 CXXC1Q9P0U4 656 aaPredicted RBP22.02■■□□□ 1.12
COL20A1-204ENST00000455906 GBF1Q92538 1859 aa22.02■■□□□ 1.12
COL20A1-204ENST00000455906 CALML3P27482 149 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 AAMPQ13685 434 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 RNF207Q6ZRF8 634 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 PLEKHM2Q8IWE5 1019 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 WNT8AQ9H1J5 351 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 OSBPL3Q9H4L5 887 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 RNF41Q9H4P4 317 aaPredicted RBP22.01■■□□□ 1.11
COL20A1-204ENST00000455906 PNMA2Q9UL42 364 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 SCN10AQ9Y5Y9 1956 aa22.01■■□□□ 1.11
COL20A1-204ENST00000455906 EDNRBP24530 442 aa22■■□□□ 1.11
COL20A1-204ENST00000455906 CCL23P55773 120 aa22■■□□□ 1.11
COL20A1-204ENST00000455906 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
COL20A1-204ENST00000455906 PURAQ00577 322 aaKnown RBP22■■□□□ 1.11
COL20A1-204ENST00000455906 ESR2Q92731 530 aa22■■□□□ 1.11
COL20A1-204ENST00000455906 VWCEQ96DN2 955 aa22■■□□□ 1.11
COL20A1-204ENST00000455906 ZKSCAN3Q9BRR0 538 aa22■■□□□ 1.11
COL20A1-204ENST00000455906 ALDH8A1Q9H2A2 487 aaPredicted RBP22■■□□□ 1.11
COL20A1-204ENST00000455906 IGHDP01880 384 aa21.99■■□□□ 1.11
COL20A1-204ENST00000455906 MFAP1P55081 439 aaKnown RBP21.99■■□□□ 1.11
COL20A1-204ENST00000455906 CHD1LQ86WJ1 897 aa21.99■■□□□ 1.11
COL20A1-204ENST00000455906 USP38Q8NB14 1042 aa21.99■■□□□ 1.11
COL20A1-204ENST00000455906 CPVLQ9H3G5 476 aa21.99■■□□□ 1.11
COL20A1-204ENST00000455906 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
COL20A1-204ENST00000455906 POLR3EQ9NVU0 708 aa21.99■■□□□ 1.11
COL20A1-204ENST00000455906 ZNF213O14771 459 aa21.98■■□□□ 1.11
COL20A1-204ENST00000455906 FGBP02675 491 aa21.98■■□□□ 1.11
COL20A1-204ENST00000455906 GOLGA8HP0CJ92 632 aa21.98■■□□□ 1.11
COL20A1-204ENST00000455906 NUCB1Q02818 461 aa21.98■■□□□ 1.11
COL20A1-204ENST00000455906 GPATCH4Q5T3I0 446 aaKnown RBP21.98■■□□□ 1.11
COL20A1-204ENST00000455906 DGKHQ86XP1 1220 aa21.98■■□□□ 1.11
COL20A1-204ENST00000455906 DNERQ8NFT8 737 aa21.98■■□□□ 1.11
COL20A1-204ENST00000455906 CPT1AP50416 773 aa21.97■■□□□ 1.11
COL20A1-204ENST00000455906 PDE4DQ08499 809 aa21.97■■□□□ 1.11
COL20A1-204ENST00000455906 OTOP2Q7RTS6 562 aa21.97■■□□□ 1.11
COL20A1-204ENST00000455906 OR6J1Q8NGC5 347 aa21.97■■□□□ 1.11
COL20A1-204ENST00000455906 UBA5Q9GZZ9 404 aa21.97■■□□□ 1.11
COL20A1-204ENST00000455906 TRMT13Q9NUP7 481 aaKnown RBP21.97■■□□□ 1.11
COL20A1-204ENST00000455906 MYL3P08590 195 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 NT5C2P49902 561 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 PPP2R5BQ15173 497 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 USH1GQ495M9 461 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 CWC27Q6UX04 472 aaKnown RBP21.96■■□□□ 1.11
COL20A1-204ENST00000455906 RGS22Q8NE09 1264 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 ANKS1AQ92625 1134 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 SCLYQ96I15 445 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 SCN5AQ14524 2016 aa21.96■■□□□ 1.11
COL20A1-204ENST00000455906 NKRFO15226 690 aaKnown RBP eCLIP21.95■■□□□ 1.1
COL20A1-204ENST00000455906 KDM4AO75164 1064 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 CYP2C9P11712 490 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 RAB30Q15771 203 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 PNMA1Q8ND90 353 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 SCFD2Q8WU76 684 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 COPS5Q92905 334 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 MTG1Q9BT17 334 aaPredicted RBP21.95■■□□□ 1.1
COL20A1-204ENST00000455906 MTIF3Q9H2K0 278 aaKnown RBP21.95■■□□□ 1.1
COL20A1-204ENST00000455906 PRDM12Q9H4Q4 367 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 YBX2Q9Y2T7 364 aaKnown RBP21.95■■□□□ 1.1
COL20A1-204ENST00000455906 MYH6P13533 1939 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 TNKSO95271 1327 aa21.95■■□□□ 1.1
COL20A1-204ENST00000455906 A6NJR5 290 aa21.94■■□□□ 1.1
COL20A1-204ENST00000455906 ARIH2O95376 493 aa21.94■■□□□ 1.1
COL20A1-204ENST00000455906 CDC37Q16543 378 aaPredicted RBP21.94■■□□□ 1.1
COL20A1-204ENST00000455906 IQCA1Q86XH1 822 aa21.94■■□□□ 1.1
COL20A1-204ENST00000455906 TBC1D5Q92609 795 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms