RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 EXOC8Q8IYI6 725 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 TTC30AQ86WT1 665 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ORAI2Q96SN7 254 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ZNF233A6NK53 670 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 GADD45BO75293 160 aaPredicted RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 RNF8O76064 485 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 YWHAGP61981 247 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ADAT2Q7Z6V5 191 aaKnown RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ATP6V1E2Q96A05 226 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ABCF3Q9NUQ8 709 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 DDX41Q9UJV9 622 aaKnown RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 SCG2P13521 617 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ATP5JP18859 108 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ADAM9Q13443 819 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 KRT33BQ14525 404 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 MAP7D3Q8IWC1 876 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 FAM71BQ8TC56 605 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 TTC1Q99614 292 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 LMCD1Q9NZU5 365 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 ARMCX3Q9UH62 379 aaPredicted RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 CPSF3Q9UKF6 684 aaKnown RBP11.04□□□□□ -0.64
SCN5A-210ENST00000455624 PTPN22Q9Y2R2 807 aa11.04□□□□□ -0.64
SCN5A-210ENST00000455624 VPS41P49754 854 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 NOSTRINQ8IVI9 506 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ACCSQ96QU6 501 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 SLC8A2Q9UPR5 921 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 PASKQ96RG2 1323 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 CLRN2A0PK11 232 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 SERPINB6P35237 376 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 STX1BP61266 288 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 UBXN2AP68543 259 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
SCN5A-210ENST00000455624 MYL3P08590 195 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ARHGAP4P98171 946 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 THOC5Q13769 683 aaKnown RBP11.03□□□□□ -0.64
SCN5A-210ENST00000455624 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 KMT5AQ9NQR1 393 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ORC6Q9Y5N6 252 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 SLC12A1Q13621 1099 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ANKRD20A4Q4UJ75 823 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ANKRD20A8PQ5CZ79 823 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ANKRD20A2Q5SQ80 823 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ANKRD20A1Q5TYW2 823 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 GANCQ8TET4 914 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 WHAMMQ8TF30 809 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 IFT122Q9HBG6 1241 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
SCN5A-210ENST00000455624 PNMA6EA0A0J9YXQ4 647 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 MED7O43513 233 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 PPP2R5EQ16537 467 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 AOC3Q16853 763 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 LRCH2Q5VUJ6 765 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ZBTB33Q86T24 672 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
SCN5A-210ENST00000455624 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
SCN5A-210ENST00000455624 ATP10DQ9P241 1426 aa11.03□□□□□ -0.64
SCN5A-210ENST00000455624 CFAP74Q9C0B2 1584 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 GNGT2O14610 69 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.64
SCN5A-210ENST00000455624 ACTN1P12814 892 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 FAM173BQ6P4H8 233 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.02□□□□□ -0.64
SCN5A-210ENST00000455624 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 RPGRIP1Q96KN7 1286 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.64
SCN5A-210ENST00000455624 ZNF148Q9UQR1 794 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 ADCY9O60503 1353 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 PTK2Q05397 1052 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 LRRC8CQ8TDW0 803 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 TRIM11Q96F44 468 aa11.02□□□□□ -0.64
SCN5A-210ENST00000455624 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.64
SCN5A-210ENST00000455624 CFAP43Q8NDM7 1665 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 ASPHQ12797 758 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 PHLDB3Q6NSJ2 640 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 MCUQ8NE86 351 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 ITM2BQ9Y287 266 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 TBX22Q9Y458 520 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 ATP10AO60312 1499 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 CPP00450 1065 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 GNGT1P63211 74 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 LONP1P36776 959 aaKnown RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 CFAP36Q96G28 342 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 HP1BP3Q5SSJ5 553 aaPredicted RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 RSRC2Q7L4I2 434 aaKnown RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 NT5C1BQ96P26 610 aa11.02□□□□□ -0.65
SCN5A-210ENST00000455624 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
SCN5A-210ENST00000455624 PPFIA2O75334 1257 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms