RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 FSCN1Q16658 493 aaKnown RBP18.89■□□□□ 0.61
GPC1-206ENST00000455111 MFSD6Q6ZSS7 791 aa18.89■□□□□ 0.61
GPC1-206ENST00000455111 TTC14Q96N46 770 aa18.89■□□□□ 0.61
GPC1-206ENST00000455111 UBA5Q9GZZ9 404 aa18.89■□□□□ 0.61
GPC1-206ENST00000455111 SCN10AQ9Y5Y9 1956 aa18.89■□□□□ 0.61
GPC1-206ENST00000455111 KIAA1217Q5T5P2 1943 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 EDNRBP24530 442 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 IQSEC1Q6DN90 963 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 PPP1R13LQ8WUF5 828 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 TRPV6Q9H1D0 765 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 VTA1Q9NP79 307 aa18.88■□□□□ 0.61
GPC1-206ENST00000455111 B4E1Z4 1266 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 B4GALT4O60513 344 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 KDM4AO75164 1064 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 VCANP13611 3396 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 GSPT1P15170 499 aaKnown RBP18.87■□□□□ 0.61
GPC1-206ENST00000455111 PBX2P40425 430 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
GPC1-206ENST00000455111 ITGA7Q13683 1181 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 AAMPQ13685 434 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 DUSP28Q4G0W2 176 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 MROH7Q68CQ1 1323 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 KIAA1211Q6ZU35 1233 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 ANKS1AQ92625 1134 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 COPS5Q92905 334 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 WNT8AQ9H1J5 351 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 CXXC1Q9P0U4 656 aaPredicted RBP18.87■□□□□ 0.61
GPC1-206ENST00000455111 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 Q9Y3F1 56 aa18.87■□□□□ 0.61
GPC1-206ENST00000455111 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 PTPDC1A2A3K4 754 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 ARIH2O95376 493 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 CALML3P27482 149 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 ZNF365Q70YC5 407 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 NOL8Q76FK4 1167 aaKnown RBP18.86■□□□□ 0.61
GPC1-206ENST00000455111 DGKHQ86XP1 1220 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 TANC1Q9C0D5 1861 aa18.86■□□□□ 0.61
GPC1-206ENST00000455111 PTPRSQ13332 1948 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 ZNF213O14771 459 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 PCP11498 1178 aaKnown RBP18.85■□□□□ 0.61
GPC1-206ENST00000455111 DNAJB2P25686 324 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 SLC35G1Q2M3R5 365 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 RNF207Q6ZRF8 634 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.85■□□□□ 0.61
GPC1-206ENST00000455111 ENAHQ8N8S7 591 aaPredicted RBP18.85■□□□□ 0.61
GPC1-206ENST00000455111 NOC4LQ9BVI4 516 aaKnown RBP18.85■□□□□ 0.61
GPC1-206ENST00000455111 COL25A1Q9BXS0 654 aaPredicted RBP18.85■□□□□ 0.61
GPC1-206ENST00000455111 WDR11Q9BZH6 1224 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 ZSWIM5Q9P217 1185 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
GPC1-206ENST00000455111 REV3LO60673 3130 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 PURAQ00577 322 aaKnown RBP18.84■□□□□ 0.61
GPC1-206ENST00000455111 USH1GQ495M9 461 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 PNMA1Q8ND90 353 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 ESR2Q92731 530 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 DSCC1Q9BVC3 393 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 PBX4Q9BYU1 374 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 AP5M1Q9H0R1 490 aa18.84■□□□□ 0.61
GPC1-206ENST00000455111 CHD7Q9P2D1 2997 aa18.83■□□□□ 0.61
GPC1-206ENST00000455111 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.83■□□□□ 0.6
GPC1-206ENST00000455111 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.83■□□□□ 0.6
GPC1-206ENST00000455111 OPLAHO14841 1288 aa18.83■□□□□ 0.6
GPC1-206ENST00000455111 PPIGQ13427 754 aaKnown RBP eCLIP18.83■□□□□ 0.6
GPC1-206ENST00000455111 CYB5R4Q7L1T6 521 aa18.83■□□□□ 0.6
GPC1-206ENST00000455111 USP38Q8NB14 1042 aa18.83■□□□□ 0.6
GPC1-206ENST00000455111 ZSCAN10Q96SZ4 725 aaPredicted RBP18.83■□□□□ 0.6
GPC1-206ENST00000455111 RNF41Q9H4P4 317 aaPredicted RBP18.83■□□□□ 0.6
GPC1-206ENST00000455111 TRMT13Q9NUP7 481 aaKnown RBP18.83■□□□□ 0.6
GPC1-206ENST00000455111 TNKSO95271 1327 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 LOC102724159A0A0B4J2E5 919 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 CABYRO75952 493 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 CCL23P55773 120 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 PWP2Q15269 919 aaKnown RBP18.82■□□□□ 0.6
GPC1-206ENST00000455111 SEC23AQ15436 765 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 CDC37Q16543 378 aaPredicted RBP18.82■□□□□ 0.6
GPC1-206ENST00000455111 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 STAG2Q8N3U4 1231 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 MAFAQ8NHW3 353 aaPredicted RBP18.82■□□□□ 0.6
GPC1-206ENST00000455111 ALDH8A1Q9H2A2 487 aaPredicted RBP18.82■□□□□ 0.6
GPC1-206ENST00000455111 HIPK3Q9H422 1215 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 IL23AQ9NPF7 189 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 DIAPH3Q9NSV4 1193 aa18.82■□□□□ 0.6
GPC1-206ENST00000455111 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
GPC1-206ENST00000455111 TMEM265A0A087WTH1 108 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
GPC1-206ENST00000455111 PPP1R11O60927 126 aaPredicted RBP18.81■□□□□ 0.6
GPC1-206ENST00000455111 QRICH1Q2TAL8 776 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 GPATCH4Q5T3I0 446 aaKnown RBP18.81■□□□□ 0.6
GPC1-206ENST00000455111 TMEM199Q8N511 208 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 HERVK_113Q902F9 699 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 SCLYQ96I15 445 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 SENP2Q9HC62 589 aa18.81■□□□□ 0.6
GPC1-206ENST00000455111 CYP2C9P11712 490 aa18.8■□□□□ 0.6
GPC1-206ENST00000455111 MFAP1P55081 439 aaKnown RBP18.8■□□□□ 0.6
GPC1-206ENST00000455111 TTC22Q5TAA0 569 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms