RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 DYNLL1P63167 89 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 MECOMQ03112 1051 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 PPP2R3AQ06190 1150 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 NAA30Q147X3 362 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 BRD3Q15059 726 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 ZNF662Q6ZS27 426 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 RSRC2Q7L4I2 434 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 TRMT44Q8IYL2 757 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 ZNF713Q8N859 430 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 EPSTI1Q96J88 318 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 CCSER1Q9C0I3 900 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 ADGRG1Q9Y653 693 aa11.9□□□□□ -0.5
GTF3C2-206ENST00000454704 A0A087X0B3 334 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 CCDC151A5D8V7 595 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 BAG3O95817 575 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 ATP2B1P20020 1258 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 ATP2B4P23634 1241 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 AFMP43652 599 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 PPP4CP60510 307 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 TERF2Q15554 542 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 TEX35Q5T0J7 233 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 WWC2Q6AWC2 1192 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 CYP26C1Q6V0L0 522 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 USP49Q70CQ1 688 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 MED15Q96RN5 788 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 CARD6Q9BX69 1037 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
GTF3C2-206ENST00000454704 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 COPB1P53618 953 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 FKBP1BP68106 108 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 ZNF174Q15697 407 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 COBLL1Q53SF7 1204 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 RRAGBQ5VZM2 374 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 FAM114A1Q8IWE2 563 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 CMTR1Q8N1G2 835 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 ZNF384Q8TF68 577 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 HNRNPLLQ8WVV9 542 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 NUP58Q9BVL2 599 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 GBP3Q9H0R5 595 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 DISC1Q9NRI5 854 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 V9GYY5 206 aaPredicted RBP11.88□□□□□ -0.51
GTF3C2-206ENST00000454704 M0R2N6 131 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 N4BP3O15049 544 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 PLCG2P16885 1265 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 STAT6P42226 847 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 RBL2Q08999 1139 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 WHAMMP3Q1A5X7 153 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 TCP11X2Q5H9J9 407 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 PIK3AP1Q6ZUJ8 805 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 TOGARAM2Q6ZUX3 1019 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 KRT25Q7Z3Z0 450 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 CTU1Q7Z7A3 348 aaKnown RBP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 GRAMD1CQ8IYS0 662 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 C4orf32Q8N8J7 132 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 EHBP1Q8NDI1 1231 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 SPZ1Q9BXG8 430 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 ARFGAP3Q9NP61 516 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 FHOD1Q9Y613 1164 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 IRS2Q9Y4H2 1338 aa11.87□□□□□ -0.51
GTF3C2-206ENST00000454704 BICDL2A1A5D9 508 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 PSMA7O14818 248 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 ERLIN1O75477 346 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 PRDM1O75626 825 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 RHOBTB3O94955 611 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 GYPCP04921 128 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 GPS2Q13227 327 aa11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
GTF3C2-206ENST00000454704 KRT31Q15323 416 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms