RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ARHGAP27Q6ZUM4 889 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 REXO1Q8N1G1 1221 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 SLC35F6Q8N357 371 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 ACRBPQ8NEB7 543 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 TBC1D16Q8TBP0 767 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 IRX2Q9BZI1 471 aaPredicted RBP14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 LRRC27Q9C0I9 530 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 ARFGAP3Q9NP61 516 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 EXOC1Q9NV70 894 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 MTMR4Q9NYA4 1195 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 SWAP70Q9UH65 585 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 SAP30BPQ9UHR5 308 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 USP21Q9UK80 565 aa14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 REXO2Q9Y3B8 237 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-209ENST00000454591 ANKRD31Q8N7Z5 1873 aa14.02□□□□□ -0.17
ECHDC1-209ENST00000454591 SERPINB2P05120 415 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 KRT83P78385 493 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 ZBED6P86452 979 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 EHHADHQ08426 723 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 SEPT2Q15019 361 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 MFSD14BQ5SR56 506 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 TEX35Q5T0J7 233 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 PPP4R3AQ6IN85 833 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 UNC13DQ70J99 1090 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 TBCKQ8TEA7 893 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 MTMR8Q96EF0 704 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 CALML4Q96GE6 196 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 TUBGCP2Q9BSJ2 902 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 FUT8Q9BYC5 575 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 COA1Q9GZY4 146 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 DAGLAQ9Y4D2 1042 aa14.01□□□□□ -0.17
ECHDC1-209ENST00000454591 A0A0U1RQJ8 604 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 EIF3CLB5ME19 914 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 CCNT1O60563 726 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 GOLGA8HP0CJ92 632 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 CLK2P49760 499 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 PDE4DQ08499 809 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 PSMD2Q13200 908 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 GRB10Q13322 594 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 LETM2Q2VYF4 491 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 TMEM119Q4V9L6 283 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 MIIPQ5JXC2 388 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 SLC27A3Q5K4L6 730 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 USP17L2Q6R6M4 530 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 SP8Q8IXZ3 490 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 GUF1Q8N442 669 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 CSGALNACT2Q8N6G5 542 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 EHBP1Q8NDI1 1231 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 PIGSQ96S52 555 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 EIF3CQ99613 913 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 ANKZF1Q9H8Y5 726 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 BLOC1S4Q9NUP1 217 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 POLLQ9UGP5 575 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 ATAD5Q96QE3 1844 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 ANO9A1A5B4 782 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 RASSF10A6NK89 507 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 EDIL3O43854 480 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 ADCY7P51828 1080 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 KIF4BQ2VIQ3 1234 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 HYIQ5T013 277 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 PAPD7Q5XG87 772 aaKnown RBP14□□□□□ -0.17
ECHDC1-209ENST00000454591 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 SV2BQ7L1I2 683 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 TRAPPC11Q7Z392 1133 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 CHP1Q99653 195 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 RAB34Q9BZG1 259 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 EDEM3Q9BZQ6 932 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 RIC8AQ9NPQ8 531 aa14□□□□□ -0.17
ECHDC1-209ENST00000454591 MYH4Q9Y623 1939 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 PNMA6FA0A0J9YX94 578 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 USP17L5A8MUK1 530 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 COBLO75128 1261 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 FGFR1OPO95684 399 aaKnown RBP13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 GCFC2P16383 781 aaKnown RBP13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 CYLC1P35663 651 aaPredicted RBP13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 HERVK_113P62684 666 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 ASIC1P78348 528 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 LRRC63Q05C16 580 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 ZNF543Q08ER8 600 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 STK4Q13043 487 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 TMEM266Q2M3C6 531 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 SLC4A8Q2Y0W8 1093 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 SLC51AQ86UW1 340 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 KIAA0895Q8NCT3 520 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 RPGRIP1Q96KN7 1286 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 GJD4Q96KN9 370 aaPredicted RBP13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 CNOT6LQ96LI5 555 aaKnown RBP13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 PNMA5Q96PV4 448 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 GLT8D2Q9H1C3 349 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
ECHDC1-209ENST00000454591 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms