RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 SLC30A9Q6PML9 568 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 POTEEQ6S8J3 1075 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 TAOK1Q7L7X3 1001 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 NLRP14Q86W24 1093 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 METTL16Q86W50 562 aaKnown RBP3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CERS3Q8IU89 383 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 FUKQ8N0W3 1084 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 NBPF15Q8N660 670 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 LRRN4CLQ8ND94 238 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 SMC1BQ8NDV3 1235 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 MYCBPAPQ8TBZ2 947 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 SH3TC2Q8TF17 1288 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 SREK1Q8WXA9 508 aaKnown RBP3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 ATRIPQ8WXE1 791 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 APPBP2Q92624 585 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 TAF4BQ92750 862 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CUL5Q93034 780 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 GFM2Q969S9 779 aaKnown RBP3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CYFIP2Q96F07 1278 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 MAML3Q96JK9 1138 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC42Q96M95 316 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 RUNDC3BQ96NL0 473 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 TRAPPC9Q96Q05 1148 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 DESI2Q9BSY9 194 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 ADAM33Q9BZ11 813 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 RAB17Q9H0T7 212 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 TAOK3Q9H2K8 898 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 EBF2Q9HAK2 575 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC40A1Q9NP59 571 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CHPF2Q9P2E5 772 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 LARSQ9P2J5 1176 aaKnown RBP3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 PARP2Q9UGN5 583 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 CAPN11Q9UMQ6 739 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 DIS3Q9Y2L1 958 aaKnown RBP3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 C15orf41Q9Y2V0 281 aa3.82□□□□□ -1.8
AC006539.3-201ENST00000454258 AFDNP55196 1824 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 C1orf167Q5SNV9 1468 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ACEP12821 1306 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 PNPLA7Q6ZV29 1317 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC189A1A4V9 331 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 LRRD1A4D1F6 860 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 MOXD2PA6NHM9 499 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 KCNJ18B7U540 433 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 E7EVH7 732 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF213O14771 459 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 FOXP2O15409 715 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 TRAPPC3O43617 180 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 AP1G2O75843 785 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 GABBR2O75899 941 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 FMNL1O95466 1100 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CTDNEP1O95476 244 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 MMP1P03956 469 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 HSPD1P10809 573 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 IFNAR1P17181 557 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CALML3P27482 149 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 HNRNPH3P31942 346 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 HSPA9P38646 679 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 GCLCP48506 637 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CEBPAP49715 358 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CLCN2P51788 898 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCNG1P51959 295 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 COPB1P53618 953 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 AMPD3Q01432 767 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 TAGLNQ01995 201 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 AIMP1Q12904 312 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 GRIK3Q13003 919 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 BIRC2Q13490 618 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 PNOCQ13519 176 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 KCNJ12Q14500 433 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SETDB1Q15047 1291 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 QPCTQ16769 361 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC96Q2M329 555 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SGSM1Q2NKQ1 1148 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 COBLL1Q53SF7 1204 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ANKRD20A8PQ5CZ79 823 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 TCP11X2Q5H9J9 407 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF658Q5TYW1 1059 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 FBXW10Q5XX13 1052 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 KRT40Q6A162 431 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SHC4Q6S5L8 630 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 RAD9BQ6WBX8 426 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 MAATS1Q7Z4T9 603 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF589Q86UQ0 364 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 VPS36Q86VN1 386 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SULF1Q8IWU6 871 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 MB21D2Q8IYB1 491 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 RPUSD2Q8IZ73 545 aaKnown RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SYCE1Q8N0S2 351 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC63Q8NA47 563 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SPATA4Q8NEY3 305 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 RASSF8Q8NHQ8 419 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC26Q8TAB7 109 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 LMBR1Q8WVP7 490 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 SYN2Q92777 582 aaPredicted RBP3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 KAT2BQ92831 832 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 CNKSR1Q969H4 720 aa3.81□□□□□ -1.8
AC006539.3-201ENST00000454258 EAF2Q96CJ1 260 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms