RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 STAG1Q8WVM7 1258 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 ARNTL2Q8WYA1 636 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 FAM122AQ96E09 287 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 CCPG1Q9ULG6 757 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 PRR12Q9ULL5 1215 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 DDX19BQ9UMR2 479 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 STX8Q9UNK0 236 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
CHEK2-220ENST00000454252 GREB1LQ9C091 1923 aaPredicted RBP8.35□□□□□ -1.07
CHEK2-220ENST00000454252 TNKSO95271 1327 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 FRMPD2Q68DX3 1309 aaPredicted RBP8.34□□□□□ -1.07
CHEK2-220ENST00000454252 ASB14A6NK59 587 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 CABYRO75952 493 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 CHMP4BP1P59074 171 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 PURAQ00577 322 aaKnown RBP8.34□□□□□ -1.07
CHEK2-220ENST00000454252 TAP1Q03518 808 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 BAATQ14032 418 aaPredicted RBP8.34□□□□□ -1.07
CHEK2-220ENST00000454252 TCTN1Q2MV58 587 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 FAM47CQ5HY64 1035 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 TMEM67Q5HYA8 995 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 VPS53Q5VIR6 699 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 GMCL1Q96IK5 515 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 MTIF3Q9H2K0 278 aaKnown RBP8.34□□□□□ -1.07
CHEK2-220ENST00000454252 CD320Q9NPF0 282 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
CHEK2-220ENST00000454252 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
CHEK2-220ENST00000454252 TRANK1O15050 2925 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 ERC2O15083 957 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 LPXNO60711 386 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 ARIH2O95376 493 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 CALML3P27482 149 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 ALDH5A1P51649 535 aaPredicted RBP8.33□□□□□ -1.08
CHEK2-220ENST00000454252 CCDC96Q2M329 555 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 DUSP28Q4G0W2 176 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 IQSEC1Q6DN90 963 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 FAM160B2Q86V87 743 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 OR6J1Q8NGC5 347 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 GDPD5Q8WTR4 605 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 LRFN3Q9BTN0 628 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 WDR11Q9BZH6 1224 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 C11orf16Q9NQ32 467 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 MTUS1Q9ULD2 1270 aa8.33□□□□□ -1.08
CHEK2-220ENST00000454252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHEK2-220ENST00000454252 PLXNA1Q9UIW2 1896 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 PTPDC1A2A3K4 754 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 TLL1O43897 1013 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 ZEB2O60315 1214 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 ICAM1P05362 532 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 NEFLP07196 543 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 DEFB103AP81534 67 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 PDE4BQ07343 736 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 GRB10Q13322 594 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 GPNMBQ14956 572 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 HERC6Q8IVU3 1022 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
CHEK2-220ENST00000454252 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 MORC4Q8TE76 937 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 CHURC1Q8WUH1 139 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 CLEC4DQ8WXI8 215 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 FTOQ9C0B1 505 aaKnown RBP eCLIP8.32□□□□□ -1.08
CHEK2-220ENST00000454252 NAPBQ9H115 298 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
CHEK2-220ENST00000454252 CPVLQ9H3G5 476 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 VTA1Q9NP79 307 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 GPCPD1Q9NPB8 672 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 LRRC37A2A6NM11 1700 aa8.32□□□□□ -1.08
CHEK2-220ENST00000454252 TSPY2A6NKD2 308 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 GTPBP6O43824 516 aaPredicted RBP8.31□□□□□ -1.08
CHEK2-220ENST00000454252 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
CHEK2-220ENST00000454252 IGHDP01880 384 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 IQCF3P0C7M6 154 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 GNAT2P19087 354 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 TKFCQ3LXA3 575 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 ZMYM1Q5SVZ6 1142 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
CHEK2-220ENST00000454252 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
CHEK2-220ENST00000454252 FSD1Q9BTV5 496 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 TSPYL2Q9H2G4 693 aaPredicted RBP8.31□□□□□ -1.08
CHEK2-220ENST00000454252 ZNF287Q9HBT7 754 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 Q9Y3F1 56 aa8.31□□□□□ -1.08
CHEK2-220ENST00000454252 ZNFX1Q9P2E3 1918 aaKnown RBP8.31□□□□□ -1.08
CHEK2-220ENST00000454252 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
CHEK2-220ENST00000454252 PLA2G6O60733 806 aa8.3□□□□□ -1.08
CHEK2-220ENST00000454252 ZFYP08048 801 aaPredicted RBP8.3□□□□□ -1.08
CHEK2-220ENST00000454252 FDX1P10109 184 aa8.3□□□□□ -1.08
CHEK2-220ENST00000454252 CPT1AP50416 773 aa8.3□□□□□ -1.08
CHEK2-220ENST00000454252 WDR5P61964 334 aaKnown RBP8.3□□□□□ -1.08
CHEK2-220ENST00000454252 RPS6P62753 249 aaKnown RBP8.3□□□□□ -1.08
CHEK2-220ENST00000454252 PPP2R5BQ15173 497 aa8.3□□□□□ -1.08
CHEK2-220ENST00000454252 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
CHEK2-220ENST00000454252 SYDE2Q5VT97 1194 aa8.3□□□□□ -1.08
CHEK2-220ENST00000454252 ERICH6BQ5W0A0 696 aa8.3□□□□□ -1.08
CHEK2-220ENST00000454252 GDF6Q6KF10 455 aaPredicted RBP8.3□□□□□ -1.08
CHEK2-220ENST00000454252 FAM117BQ6P1L5 589 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms