RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 DCAF4Q8WV16 495 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 ZNF341Q9BYN7 854 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 PSD3Q9NYI0 1048 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 SEC63Q9UGP8 760 aaKnown RBP9.63□□□□□ -0.87
LMO3-210ENST00000453727 PCDHA7Q9UN72 937 aa9.63□□□□□ -0.87
LMO3-210ENST00000453727 SPTLC2O15270 562 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 CTNND1O60716 968 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 NDUFB10O96000 172 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 ME1P48163 572 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 PRKG1Q13976 671 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 SLC39A14Q15043 492 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 PTPAQ15257 358 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 DNAJC21Q5F1R6 531 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 MMS22LQ6ZRQ5 1243 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 CCDC84Q86UT8 332 aaPredicted RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 BICD2Q8TD16 824 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 CACTINQ8WUQ7 758 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 UBXN4Q92575 508 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 WRNIP1Q96S55 665 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 NUP88Q99567 741 aaPredicted RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 JMJD4Q9H9V9 463 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 WDR90Q96KV7 1748 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 EIF3CLB5ME19 914 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 ZRANB2O95218 330 aaKnown RBP eCLIP9.62□□□□□ -0.87
LMO3-210ENST00000453727 CALML3P27482 149 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 SMC1AQ14683 1233 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 ZRSR1Q15695 479 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 RILPL1Q5EBL4 403 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 NYAP1Q6ZVC0 841 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 CCDC148Q8NFR7 591 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 ZKSCAN4Q969J2 545 aaPredicted RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 EIF3CQ99613 913 aaKnown RBP9.62□□□□□ -0.87
LMO3-210ENST00000453727 PCDHA4Q9UN74 947 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 CLEC11AQ9Y240 323 aa9.62□□□□□ -0.87
LMO3-210ENST00000453727 SSC5DA1L4H1 1573 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 POTEIP0CG38 1075 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 MARCKSP29966 332 aaPredicted RBP9.61□□□□□ -0.87
LMO3-210ENST00000453727 ZNF75DP51815 510 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 NAPAP54920 295 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 KIAA1755Q5JYT7 1200 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 BLIDQ8IZY5 108 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 RNF217Q8TC41 542 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 KLRG1Q96E93 195 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 GLIS2Q9BZE0 524 aaPredicted RBP9.61□□□□□ -0.87
LMO3-210ENST00000453727 TMX2Q9Y320 296 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 PCDHB6Q9Y5E3 794 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 M0R2N6 131 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 TPM1P09493 284 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 ADALQ6DHV7 355 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 PIK3AP1Q6ZUJ8 805 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 RPAINQ86UA6 219 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 LUZP1Q86V48 1076 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 LRRC8AQ8IWT6 810 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 SPICE1Q8N0Z3 855 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 RASGRP4Q8TDF6 673 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 COA7Q96BR5 231 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 RRAGCQ9HB90 399 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 TRMT1Q9NXH9 659 aaKnown RBP9.61□□□□□ -0.87
LMO3-210ENST00000453727 ZNF112Q9UJU3 913 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 ADAM21Q9UKJ8 722 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 SYNPO2Q9UMS6 1093 aa9.61□□□□□ -0.87
LMO3-210ENST00000453727 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 WNT7AO00755 349 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 PPP1R12AO14974 1030 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 PPP1R12BO60237 982 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 PPP1R11O60927 126 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 NR1I2O75469 434 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 BMP3P12645 472 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 SKILP12757 684 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 ZYXQ15942 572 aaKnown RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 CCAR1Q8IX12 1150 aaKnown RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 SCYL3Q8IZE3 742 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 DAGLBQ8NCG7 672 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 CCDC12Q8WUD4 166 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 MTMR8Q96EF0 704 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 ZMYND12Q9H0C1 365 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 GOLPH3LQ9H4A5 285 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 SH2D4AQ9H788 454 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 GINM1Q9NU53 330 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 SMCO2A6NFE2 343 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 USP27XA6NNY8 438 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 hCG_1984214I3L0E3 225 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 ZBTB5O15062 677 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 PPP6R2O75170 966 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 USP2O75604 605 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 PLA2G4DQ86XP0 818 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 FAM177A1Q8N128 213 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 ZNF713Q8N859 430 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 ZNF526Q8TF50 670 aaPredicted RBP9.6□□□□□ -0.87
LMO3-210ENST00000453727 CDCA5Q96FF9 252 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 GOPCQ9HD26 462 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms