RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 AGXT2Q9BYV1 514 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 DDX49Q9Y6V7 483 aaKnown RBP16.99■□□□□ 0.31
VPS16-205ENST00000453689 ASB14A6NK59 587 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 PLEKHA8P1O95397 391 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 AKR1A1P14550 325 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 ALDH5A1P51649 535 aaPredicted RBP16.98■□□□□ 0.31
VPS16-205ENST00000453689 ACVR2BQ13705 512 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 TBC1D5Q92609 795 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 KATNBL1Q9H079 304 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 ABHD16BQ9H3Z7 469 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
VPS16-205ENST00000453689 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
VPS16-205ENST00000453689 MRPL11Q9Y3B7 192 aaKnown RBP16.98■□□□□ 0.31
VPS16-205ENST00000453689 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 OPLAHO14841 1288 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 SMARCA1P28370 1054 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 GNAQP50148 359 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 NEK4P51957 841 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 SYNE3Q6ZMZ3 975 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 NECAB2Q7Z6G3 386 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 SRBD1Q8N5C6 995 aaKnown RBP16.97■□□□□ 0.31
VPS16-205ENST00000453689 FANCBQ8NB91 859 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 BRF1Q92994 677 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 LZTS2Q9BRK4 669 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 MAF1Q9H063 256 aa16.97■□□□□ 0.31
VPS16-205ENST00000453689 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
VPS16-205ENST00000453689 ADD3Q9UEY8 706 aaKnown RBP16.97■□□□□ 0.31
VPS16-205ENST00000453689 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
VPS16-205ENST00000453689 RARBP10826 455 aa16.96■□□□□ 0.31
VPS16-205ENST00000453689 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
VPS16-205ENST00000453689 MORC4Q8TE76 937 aa16.96■□□□□ 0.31
VPS16-205ENST00000453689 LENG1Q96BZ8 264 aaPredicted RBP16.96■□□□□ 0.31
VPS16-205ENST00000453689 FAM184BQ9ULE4 1060 aa16.96■□□□□ 0.31
VPS16-205ENST00000453689 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
VPS16-205ENST00000453689 LOC102724159A0A0B4J2E5 919 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 ZBTB43O43298 467 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 ADCY6O43306 1168 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 APOBRQ0VD83 1088 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 TRAF1Q13077 416 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
VPS16-205ENST00000453689 PWP2Q15269 919 aaKnown RBP16.95■□□□□ 0.3
VPS16-205ENST00000453689 ANKRD1Q15327 319 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 MCF2L2Q86YR7 1114 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 DNERQ8NFT8 737 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 RRP36Q96EU6 259 aaKnown RBP16.95■□□□□ 0.3
VPS16-205ENST00000453689 HTATIP2Q9BUP3 242 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 C11orf49Q9H6J7 331 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 XPNPEP3Q9NQH7 507 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 COL20A1Q9P218 1284 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 DOCK5Q9H7D0 1870 aa16.95■□□□□ 0.3
VPS16-205ENST00000453689 DNM1LO00429 736 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 CFBP00751 764 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 COL6A1P12109 1028 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 AK2P54819 239 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 GHRHRQ02643 423 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 LRRC41Q15345 812 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 GJC2Q5T442 439 aaPredicted RBP16.94■□□□□ 0.3
VPS16-205ENST00000453689 EEPD1Q7L9B9 569 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 FBXO16Q8IX29 292 aaPredicted RBP16.94■□□□□ 0.3
VPS16-205ENST00000453689 ARRDC4Q8NCT1 418 aa16.94■□□□□ 0.3
VPS16-205ENST00000453689 SYTL5Q8TDW5 730 aaPredicted RBP16.94■□□□□ 0.3
VPS16-205ENST00000453689 RBM28Q9NW13 759 aaKnown RBP16.94■□□□□ 0.3
VPS16-205ENST00000453689 GOLGA8AA7E2F4 631 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 GOLGA8BA8MQT2 603 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 ST18O60284 1047 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 PGK1P00558 417 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 EDNRBP24530 442 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 HSD17B4P51659 736 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 RCAN1P53805 252 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 EVCP57679 992 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 RTN1Q16799 776 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 TAAR1Q96RJ0 339 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 VTA1Q9NP79 307 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 FAM217BQ9NTX9 383 aaPredicted RBP16.93■□□□□ 0.3
VPS16-205ENST00000453689 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
VPS16-205ENST00000453689 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
VPS16-205ENST00000453689 CNTNAP5Q8WYK1 1306 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
VPS16-205ENST00000453689 NID2Q14112 1375 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.92■□□□□ 0.3
VPS16-205ENST00000453689 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 DUSP11O75319 330 aaKnown RBP16.92■□□□□ 0.3
VPS16-205ENST00000453689 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
VPS16-205ENST00000453689 ADCYAP1R1P41586 468 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 PDE4DQ08499 809 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 SAMD3Q8N6K7 520 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 DPF3Q92784 378 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 MPHOSPH6Q99547 160 aaKnown RBP16.92■□□□□ 0.3
VPS16-205ENST00000453689 PDGFCQ9NRA1 345 aa16.92■□□□□ 0.3
VPS16-205ENST00000453689 MAP3K20Q9NYL2 800 aaKnown RBP16.92■□□□□ 0.3
VPS16-205ENST00000453689 hCG_1642624A0A1W2PR95 340 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms