RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CLEC4DQ8WXI8 215 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 MRPS27Q92552 414 aaKnown RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 OTUD5Q96G74 571 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TMEM60Q9H2L4 133 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 RAVER2Q9HCJ3 691 aaKnown RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 DACT1Q9NYF0 836 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 TMOD4Q9NZQ9 345 aa6.84□□□□□ -1.31
SDC4P-201ENST00000453285 MRPL11Q9Y3B7 192 aaKnown RBP6.84□□□□□ -1.31
SDC4P-201ENST00000453285 MYH9P35579 1960 aaKnown RBP6.84□□□□□ -1.32
SDC4P-201ENST00000453285 PLXNB2O15031 1838 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 MYH11P35749 1972 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CYP3A7-CYP3A51PA0A087WV96 503 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 SPDYE16A6NNV3 312 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ATP2A1O14983 1001 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ZBED4O75132 1171 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 TDP2O95551 362 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 FOSP01100 380 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 PFKFB1P16118 471 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CYP3A7P24462 503 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 HSD17B4P51659 736 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 USP11P51784 963 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 NDUFA8P51970 172 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 C1QTNF8P60827 252 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 FKBP1BP68106 108 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 FAM160A1Q05DH4 1040 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 AP3B2Q13367 1082 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ORC2Q13416 577 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 LETM2Q2VYF4 491 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 MUM1L1Q5H9M0 696 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 SPECC1Q5M775 1068 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CCDC183Q5T5S1 534 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CST9Q5W186 159 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ARL6IP4Q66PJ3 421 aaKnown RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 PPP4R3AQ6IN85 833 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 GPAT2Q6NUI2 795 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CHADLQ6NUI6 762 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 SAMD1Q6SPF0 538 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 RBM43Q6ZSC3 357 aaKnown RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 USP49Q70CQ1 688 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 GAS2L3Q86XJ1 694 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CPXCR1Q8N123 301 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 PROCA1Q8NCQ7 364 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ZNF526Q8TF50 670 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 FERMT2Q96AC1 680 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 OPTNQ96CV9 577 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 MBOAT7Q96N66 472 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 MTMR9Q96QG7 549 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ANO3Q9BYT9 981 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CSRNP2Q9H175 543 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CLSTN2Q9H4D0 955 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ZNF408Q9H9D4 720 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 GBA2Q9HCG7 927 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 DDX19AQ9NUU7 478 aaKnown RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 HOXC10Q9NYD6 342 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 ZNF214Q9UL59 606 aaPredicted RBP6.83□□□□□ -1.32
SDC4P-201ENST00000453285 CCPG1Q9ULG6 757 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 RIPK3Q9Y572 518 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 LOXHD1Q8IVV2 1947 aa6.83□□□□□ -1.32
SDC4P-201ENST00000453285 LRRC37A2A6NM11 1700 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 SYCE3A1L190 88 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 GCOM1H8Y6P7 765 aaPredicted RBP6.82□□□□□ -1.32
SDC4P-201ENST00000453285 LAD1O00515 517 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 NFIBO00712 420 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 SLC37A4O43826 429 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 CCNT1O60563 726 aaKnown RBP6.82□□□□□ -1.32
SDC4P-201ENST00000453285 ZNF202O95125 648 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 CELF2O95319 508 aaKnown RBP6.82□□□□□ -1.32
SDC4P-201ENST00000453285 CFBP00751 764 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 CYP3A4P08684 503 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 POLR2MP0CAP2 368 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 ALAS1P13196 640 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 HOXA13P31271 388 aaPredicted RBP6.82□□□□□ -1.32
SDC4P-201ENST00000453285 CIITAP33076 1130 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 SREBF1P36956 1147 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 PRPHP41219 470 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 OAZ1P54368 228 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 GSE1Q14687 1217 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 TMEM132BQ14DG7 1078 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 MOXD1Q6UVY6 613 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 LBX2Q6XYB7 198 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 GADL1Q6ZQY3 521 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 CCDC73Q6ZRK6 1079 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 SAMD3Q8N6K7 520 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 SYAP1Q96A49 352 aaPredicted RBP6.82□□□□□ -1.32
SDC4P-201ENST00000453285 SLC10A4Q96EP9 437 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 MS4A4AQ96JQ5 239 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 FUCA2Q9BTY2 467 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 MAP3K20Q9NYL2 800 aaKnown RBP6.82□□□□□ -1.32
SDC4P-201ENST00000453285 COL20A1Q9P218 1284 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 PNMA2Q9UL42 364 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 AGTPBP1Q9UPW5 1226 aa6.82□□□□□ -1.32
SDC4P-201ENST00000453285 MGAMO43451 1857 aa6.81□□□□□ -1.32
SDC4P-201ENST00000453285 RPTORQ8N122 1335 aa6.81□□□□□ -1.32
SDC4P-201ENST00000453285 A0A087X0B3 334 aa6.81□□□□□ -1.32
SDC4P-201ENST00000453285 FSD2A1L4K1 749 aa6.81□□□□□ -1.32
SDC4P-201ENST00000453285 VWA3AA6NCI4 1184 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms