RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
CHD3-206ENST00000452447 RPS6P62753 249 aaKnown RBP15.06■□□□□ 0
CHD3-206ENST00000452447 NKX3-2P78367 333 aa15.06■□□□□ 0
CHD3-206ENST00000452447 FAAP100Q0VG06 881 aa15.06■□□□□ 0
CHD3-206ENST00000452447 CDC37Q16543 378 aaPredicted RBP15.06■□□□□ 0
CHD3-206ENST00000452447 TAPT1Q6NXT6 567 aa15.06■□□□□ 0
CHD3-206ENST00000452447 ADGRF4Q8IZF3 695 aa15.06■□□□□ 0
CHD3-206ENST00000452447 MORC4Q8TE76 937 aa15.06■□□□□ 0
CHD3-206ENST00000452447 BAZ2BQ9UIF8 2168 aaKnown RBP15.05■□□□□ 0
CHD3-206ENST00000452447 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ -0
CHD3-206ENST00000452447 CTAGE5O15320 804 aa15.05■□□□□ -0
CHD3-206ENST00000452447 PTH1RQ03431 593 aa15.05■□□□□ -0
CHD3-206ENST00000452447 PDE4DQ08499 809 aa15.05■□□□□ -0
CHD3-206ENST00000452447 FSCN1Q16658 493 aaKnown RBP15.05■□□□□ -0
CHD3-206ENST00000452447 RALYLQ86SE5 291 aaKnown RBP15.05■□□□□ -0
CHD3-206ENST00000452447 DEFB123Q8N688 67 aa15.05■□□□□ -0
CHD3-206ENST00000452447 DNERQ8NFT8 737 aa15.05■□□□□ -0
CHD3-206ENST00000452447 VAT1LQ9HCJ6 419 aa15.05■□□□□ -0
CHD3-206ENST00000452447 Q9Y3F1 56 aa15.05■□□□□ -0
CHD3-206ENST00000452447 LRRC37A2A6NM11 1700 aa15.05■□□□□ -0
CHD3-206ENST00000452447 ERICH2A1L162 156 aa15.04■□□□□ -0
CHD3-206ENST00000452447 ARVCFO00192 962 aa15.04■□□□□ -0
CHD3-206ENST00000452447 SGSM2O43147 1006 aa15.04■□□□□ -0
CHD3-206ENST00000452447 CABYRO75952 493 aa15.04■□□□□ -0
CHD3-206ENST00000452447 CYP21A2P08686 494 aa15.04■□□□□ -0
CHD3-206ENST00000452447 CDK7P50613 346 aa15.04■□□□□ -0
CHD3-206ENST00000452447 SHHQ15465 462 aa15.04■□□□□ -0
CHD3-206ENST00000452447 CXCL17Q6UXB2 119 aa15.04■□□□□ -0
CHD3-206ENST00000452447 RGS22Q8NE09 1264 aa15.04■□□□□ -0
CHD3-206ENST00000452447 WDR11Q9BZH6 1224 aa15.04■□□□□ -0
CHD3-206ENST00000452447 ABCB11O95342 1321 aa15.03■□□□□ -0
CHD3-206ENST00000452447 TLR3O15455 904 aaKnown RBP15.03■□□□□ -0
CHD3-206ENST00000452447 ITGB8P26012 769 aa15.03■□□□□ -0
CHD3-206ENST00000452447 FPGSQ05932 587 aa15.03■□□□□ -0
CHD3-206ENST00000452447 DUSP28Q4G0W2 176 aa15.03■□□□□ -0
CHD3-206ENST00000452447 CYB5R4Q7L1T6 521 aa15.03■□□□□ -0
CHD3-206ENST00000452447 MAF1Q9H063 256 aa15.03■□□□□ -0
CHD3-206ENST00000452447 KLRF2D3W0D1 207 aa15.02■□□□□ -0
CHD3-206ENST00000452447 IFIT3O14879 490 aaKnown RBP15.02■□□□□ -0
CHD3-206ENST00000452447 PTGS1P23219 599 aa15.02■□□□□ -0
CHD3-206ENST00000452447 SART3Q15020 963 aaKnown RBP15.02■□□□□ -0
CHD3-206ENST00000452447 SEC23AQ15436 765 aa15.02■□□□□ -0
CHD3-206ENST00000452447 QRICH1Q2TAL8 776 aa15.02■□□□□ -0
CHD3-206ENST00000452447 C9orf50Q5SZB4 431 aa15.02■□□□□ -0
CHD3-206ENST00000452447 Q7L0L9 218 aa15.02■□□□□ -0
CHD3-206ENST00000452447 FBXO11Q86XK2 927 aa15.02■□□□□ -0
CHD3-206ENST00000452447 MCF2L2Q86YR7 1114 aa15.02■□□□□ -0
CHD3-206ENST00000452447 NCOA7Q8NI08 942 aa15.02■□□□□ -0
CHD3-206ENST00000452447 JMJD4Q9H9V9 463 aa15.02■□□□□ -0
CHD3-206ENST00000452447 MRPL11Q9Y3B7 192 aaKnown RBP15.02■□□□□ -0
CHD3-206ENST00000452447 E7EWF7 191 aa15.02□□□□□ -0.01
CHD3-206ENST00000452447 TIMP1P01033 207 aa15.02□□□□□ -0.01
CHD3-206ENST00000452447 TMEM63BQ5T3F8 832 aa15.02□□□□□ -0.01
CHD3-206ENST00000452447 TBX21Q9UL17 535 aa15.02□□□□□ -0.01
CHD3-206ENST00000452447 MYO9BQ13459 2157 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 RBM47A0AV96 593 aaKnown RBP15.01□□□□□ -0.01
CHD3-206ENST00000452447 EDNRBP24530 442 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 CPT1AP50416 773 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 ITGA7Q13683 1181 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 PPP2R5BQ15173 497 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 BRDTQ58F21 947 aaPredicted RBP15.01□□□□□ -0.01
CHD3-206ENST00000452447 FAM126BQ8IXS8 530 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 STAG2Q8N3U4 1231 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 SCFD2Q8WU76 684 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 AMNQ9BXJ7 453 aa15.01□□□□□ -0.01
CHD3-206ENST00000452447 A0A0C4DFX4 3053 aa15□□□□□ -0.01
CHD3-206ENST00000452447 NKRFO15226 690 aaKnown RBP eCLIP15□□□□□ -0.01
CHD3-206ENST00000452447 WTAPQ15007 396 aa15□□□□□ -0.01
CHD3-206ENST00000452447 MFSD5Q6N075 450 aa15□□□□□ -0.01
CHD3-206ENST00000452447 OR6J1Q8NGC5 347 aa15□□□□□ -0.01
CHD3-206ENST00000452447 NSUN6Q8TEA1 469 aaKnown RBP15□□□□□ -0.01
CHD3-206ENST00000452447 TBC1D5Q92609 795 aa15□□□□□ -0.01
CHD3-206ENST00000452447 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
CHD3-206ENST00000452447 SEZ6LQ9BYH1 1024 aa15□□□□□ -0.01
CHD3-206ENST00000452447 GPHNQ9NQX3 736 aaPredicted RBP15□□□□□ -0.01
CHD3-206ENST00000452447 MAD2L2Q9UI95 211 aa15□□□□□ -0.01
CHD3-206ENST00000452447 TTLL4Q14679 1199 aa14.99□□□□□ -0.01
CHD3-206ENST00000452447 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
CHD3-206ENST00000452447 SLC43A3Q8NBI5 491 aa14.99□□□□□ -0.01
CHD3-206ENST00000452447 SYTL5Q8TDW5 730 aaPredicted RBP14.99□□□□□ -0.01
CHD3-206ENST00000452447 PPP1R12CQ9BZL4 782 aa14.99□□□□□ -0.01
CHD3-206ENST00000452447 POLR3EQ9NVU0 708 aa14.99□□□□□ -0.01
CHD3-206ENST00000452447 RBM8AQ9Y5S9 174 aaKnown RBP14.99□□□□□ -0.01
CHD3-206ENST00000452447 KIAA1217Q5T5P2 1943 aa14.99□□□□□ -0.01
CHD3-206ENST00000452447 PALM3A6NDB9 673 aaPredicted RBP14.98□□□□□ -0.01
CHD3-206ENST00000452447 ZBTB5O15062 677 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 CFBP00751 764 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 TXNP10599 105 aaKnown RBP14.98□□□□□ -0.01
CHD3-206ENST00000452447 EPHB4P54760 987 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 GRM4Q14833 912 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 TMEM67Q5HYA8 995 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 TMEM199Q8N511 208 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 TAAR1Q96RJ0 339 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 IWS1Q96ST2 819 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 RMDN3Q96TC7 470 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 MTMR10Q9NXD2 777 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
CHD3-206ENST00000452447 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms