RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TGS1Q96RS0 853 aaKnown RBP9.67□□□□□ -0.86
LINC01961-201ENST00000449954 SPSB2Q99619 263 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 FSD1Q9BTV5 496 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 SLC6A16Q9GZN6 736 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 SUGCTQ9HAC7 445 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 ALG13Q9NP73 1137 aaKnown RBP9.67□□□□□ -0.86
LINC01961-201ENST00000449954 CABP5Q9NP86 173 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
LINC01961-201ENST00000449954 SIP14410 1827 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 ACACBO00763 2458 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 CDK5RAP2Q96SN8 1893 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 ZMYND10O75800 440 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 FLOT1O75955 427 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
LINC01961-201ENST00000449954 SUPT20HL2P0C7V6 817 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 CD46P15529 392 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 CLCN1P35523 988 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 KCNJ6P48051 423 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 RFX5P48382 616 aaPredicted RBP9.66□□□□□ -0.86
LINC01961-201ENST00000449954 ERVK-21P61565 698 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 MVPQ14764 893 aaKnown RBP9.66□□□□□ -0.86
LINC01961-201ENST00000449954 ABCB5Q2M3G0 1257 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 DEFB128Q7Z7B8 93 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 RIOX2Q8IUF8 465 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 TGFBRAP1Q8WUH2 860 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 EHD4Q9H223 541 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 ABHD16BQ9H3Z7 469 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 RAI14Q9P0K7 980 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 SLC27A5Q9Y2P5 690 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 TANC1Q9C0D5 1861 aa9.66□□□□□ -0.86
LINC01961-201ENST00000449954 ATRXP46100 2492 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 COL4A6Q14031 1691 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 MED19A0JLT2 244 aaPredicted RBP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 VAMP4O75379 141 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 ADORA1P30542 326 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 IL15P40933 162 aaPredicted RBP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 NBL1P41271 181 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 ACVR2BQ13705 512 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 COL19A1Q14993 1142 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 TMEM132BQ14DG7 1078 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 SMAD2Q15796 467 aaKnown RBP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 PTPROQ16827 1216 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 NBPF20Q3BBV1 942 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 CERKLQ49MI3 558 aaPredicted RBP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 CXCL17Q6UXB2 119 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 MAGEB6Q8N7X4 407 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 CCER1Q8TC90 406 aaPredicted RBP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 ATG4CQ96DT6 458 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 MRPL38Q96DV4 380 aaKnown RBP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 TRPV6Q9H1D0 765 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 GPCPD1Q9NPB8 672 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 AATFQ9NY61 560 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC01961-201ENST00000449954 SERPINB13Q9UIV8 391 aa9.65□□□□□ -0.86
LINC01961-201ENST00000449954 ZNF292O60281 2723 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 FANCIQ9NVI1 1328 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 PARP14Q460N5 1801 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 A0A1B0GUL7 405 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 LCHNA4D1U4 455 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 CTAGE5O15320 804 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 ADCY6O43306 1168 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 ZEB2O60315 1214 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 CCDC27Q2M243 656 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 CCDC144BQ3MJ40 725 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 MCTP2Q6DN12 878 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 DGLUCYQ7Z3D6 616 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 ALDH8A1Q9H2A2 487 aaPredicted RBP9.64□□□□□ -0.87
LINC01961-201ENST00000449954 MTUS1Q9ULD2 1270 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 WDR87Q6ZQQ6 2873 aa9.64□□□□□ -0.87
LINC01961-201ENST00000449954 GRIN2DO15399 1336 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 H0Y858 1186 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 NCK2O43639 380 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 KDM4AO75164 1064 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 AVPR2P30518 371 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 SLC19A1P41440 591 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 SPATA5Q8NB90 893 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 RAD9AQ99638 391 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 CNTNAP3Q9BZ76 1288 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 FTOQ9C0B1 505 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC01961-201ENST00000449954 TLR9Q9NR96 1032 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 HMG20BQ9P0W2 317 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 LRP2BPQ9P2M1 347 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 SAP30BPQ9UHR5 308 aaKnown RBP9.63□□□□□ -0.87
LINC01961-201ENST00000449954 SCN5AQ14524 2016 aa9.63□□□□□ -0.87
LINC01961-201ENST00000449954 DNAJC25-GNG10A0A024R161 153 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 LINC01553A4QN01 128 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 IGSF3O75054 1194 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 STAT3P40763 770 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 VCPP55072 806 aaKnown RBP9.62□□□□□ -0.87
LINC01961-201ENST00000449954 ZXDAP98168 799 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 BEX3Q00994 111 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 SIGLEC14Q08ET2 396 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 FSCN1Q16658 493 aaKnown RBP9.62□□□□□ -0.87
LINC01961-201ENST00000449954 NAA16Q6N069 864 aaPredicted RBP9.62□□□□□ -0.87
LINC01961-201ENST00000449954 TLK2Q86UE8 772 aa9.62□□□□□ -0.87
LINC01961-201ENST00000449954 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms