RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PLTPP55058 493 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 SESN3P58005 492 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 PNMA1Q8ND90 353 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 ZIM3Q96PE6 472 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 SUFUQ9UMX1 484 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 A0A087X0B3 334 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 MAP2K7O14733 419 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 PDE8AO60658 829 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 LRCH2Q5VUJ6 765 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 ZBTB38Q8NAP3 1195 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 CYP2D6P10635 497 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 SARNPP82979 210 aaKnown RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 CCDC26Q8TAB7 109 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 PTPN22Q9Y2R2 807 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 FAM167BQ9BTA0 163 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 NDST4Q9H3R1 872 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 GPR108Q9NPR9 543 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 RGS16O15492 202 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 KCNQ4P56696 695 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 MAGOHP61326 146 aaKnown RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 ENAHQ8N8S7 591 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 MAGOHBQ96A72 148 aaKnown RBP13.66□□□□□ -0.22
UBE3B-204ENST00000449510 DYNLL2Q96FJ2 89 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 KLC4Q9NSK0 619 aa13.66□□□□□ -0.22
UBE3B-204ENST00000449510 DEPDC5O75140 1603 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 CHUKO15111 745 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 MEFVO15553 781 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-204ENST00000449510 ZNF18P17022 549 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 EEF1GP26641 437 aaKnown RBP13.65□□□□□ -0.22
UBE3B-204ENST00000449510 SLC1A4P43007 532 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 IFI16Q16666 785 aaKnown RBP13.65□□□□□ -0.22
UBE3B-204ENST00000449510 CCDC63Q8NA47 563 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 PDE2AO00408 941 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-204ENST00000449510 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
UBE3B-204ENST00000449510 NLRP14Q86W24 1093 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 TMEM139Q8IV31 216 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
UBE3B-204ENST00000449510 LSP1P33241 339 aa13.65□□□□□ -0.23
UBE3B-204ENST00000449510 NONOQ15233 471 aaKnown RBP eCLIP13.65□□□□□ -0.23
UBE3B-204ENST00000449510 ANKRD40Q6AI12 368 aa13.65□□□□□ -0.23
UBE3B-204ENST00000449510 VSIG1Q86XK7 387 aa13.65□□□□□ -0.23
UBE3B-204ENST00000449510 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.23
UBE3B-204ENST00000449510 NBPF3Q9H094 633 aa13.65□□□□□ -0.23
UBE3B-204ENST00000449510 HSD3B7Q9H2F3 369 aa13.65□□□□□ -0.23
UBE3B-204ENST00000449510 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-204ENST00000449510 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 IL2RBP14784 551 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 ERFP50548 548 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 DPYDQ12882 1025 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 RABL6Q3YEC7 729 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-204ENST00000449510 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 DISC1Q9NRI5 854 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 SNX12Q9UMY4 172 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 MYBL1P10243 752 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 STK4Q13043 487 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 CALCRLQ16602 461 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 CCDC38Q502W7 563 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
UBE3B-204ENST00000449510 TBX2Q13207 712 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 TGFBRAP1Q8WUH2 860 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 TBK1Q9UHD2 729 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 ZBTB1Q9Y2K1 713 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 CHMP2AO43633 222 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 PPP1R37O75864 691 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 SCP2P22307 547 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 GNA11P29992 359 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 CDC25CP30307 473 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 PMS1P54277 932 aaKnown RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 LRRC14Q15048 493 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 CCDC105Q8IYK2 499 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 PKD2L1Q9P0L9 805 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 LIMA1Q9UHB6 759 aaKnown RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms