RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
LINC02561-201ENST00000449457 DEFB128Q7Z7B8 93 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
LINC02561-201ENST00000449457 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 C11orf16Q9NQ32 467 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 PDGFCQ9NRA1 345 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
LINC02561-201ENST00000449457 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 CD4P01730 458 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 FGBP02675 491 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 CA3P07451 260 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 CYP2C9P11712 490 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 CST5P28325 142 aaPredicted RBP11.93□□□□□ -0.5
LINC02561-201ENST00000449457 PSEN2P49810 448 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 PROX2Q3B8N5 592 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 C16orf86Q6ZW13 317 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 FBXO16Q8IX29 292 aaPredicted RBP11.93□□□□□ -0.5
LINC02561-201ENST00000449457 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 UPF3AQ9H1J1 476 aaKnown RBP11.93□□□□□ -0.5
LINC02561-201ENST00000449457 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 SWAP70Q9UH65 585 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 ISY1Q9ULR0 285 aaKnown RBP11.93□□□□□ -0.5
LINC02561-201ENST00000449457 DIS3Q9Y2L1 958 aaKnown RBP11.93□□□□□ -0.5
LINC02561-201ENST00000449457 MYH7P12883 1935 aa11.93□□□□□ -0.5
LINC02561-201ENST00000449457 MROH7Q68CQ1 1323 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 EMP3P54852 163 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 GJA9P57773 515 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 ARNTL2Q8WYA1 636 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 DDRGK1Q96HY6 314 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
LINC02561-201ENST00000449457 TEX13BQ9BXU2 312 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 CD320Q9NPF0 282 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
LINC02561-201ENST00000449457 MTCH2Q9Y6C9 303 aa11.92□□□□□ -0.5
LINC02561-201ENST00000449457 ELP1O95163 1332 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 IPO8O15397 1037 aaKnown RBP11.91□□□□□ -0.5
LINC02561-201ENST00000449457 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
LINC02561-201ENST00000449457 PRDM1O75626 825 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 ADD2P35612 726 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 ZKSCAN2Q63HK3 967 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 NUDT18Q6ZVK8 323 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 CERS3Q8IU89 383 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 ANKRD35Q8N283 1001 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
LINC02561-201ENST00000449457 SLC4A4Q9Y6R1 1079 aa11.91□□□□□ -0.5
LINC02561-201ENST00000449457 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 ATP2A2P16615 1042 aaKnown RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 SMPD1P17405 629 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 RASA1P20936 1047 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 SSTR3P32745 418 aaPredicted RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 ALYREFQ86V81 257 aaKnown RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 PANK1Q8TE04 598 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 GDPD5Q8WTR4 605 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 PUS7LQ9H0K6 701 aaKnown RBP11.9□□□□□ -0.5
LINC02561-201ENST00000449457 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
LINC02561-201ENST00000449457 TANC1Q9C0D5 1861 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 F5H6K3 240 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 KLRC3Q07444 240 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
LINC02561-201ENST00000449457 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 PAG1Q9NWQ8 432 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 CLIP2Q9UDT6 1046 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 HCN4Q9Y3Q4 1203 aa11.89□□□□□ -0.51
LINC02561-201ENST00000449457 CTDP1Q9Y5B0 961 aaPredicted RBP11.89□□□□□ -0.51
LINC02561-201ENST00000449457 ZBED9Q6R2W3 1325 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 CHMP4BP1P59074 171 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 TTF1Q15361 905 aaPredicted RBP11.88□□□□□ -0.51
LINC02561-201ENST00000449457 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 TATDN2Q93075 761 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms