RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GOLGA6DP0CG33 693 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 ADD2P35612 726 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 SLC16A2P36021 539 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 USP8P40818 1118 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 TBC1D8BQ0IIM8 1120 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 DNTTIP2Q5QJE6 756 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GJC2Q5T442 439 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 MIS18BP1Q6P0N0 1132 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 FERMT1Q9BQL6 677 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 VCPKMTQ9H867 229 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA6AQ9NYA3 693 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 MAP3K20Q9NYL2 800 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 KRT19P08727 400 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 CCDC192P0DO97 292 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 HERVK_113P62684 666 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 FKBP1AP62942 108 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PTGDRQ13258 359 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 VGLL4Q14135 290 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 IKBKEQ14164 716 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 RCSD1Q6JBY9 416 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 MOB2Q70IA6 237 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 STAMQ92783 540 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 APOL5Q9BWW9 433 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 TEKT3Q9BXF9 490 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZBTB40Q9NUA8 1239 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 KRT13P13646 458 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 ELNP15502 786 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA8FQ08AF8 430 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA8DPQ0D2H9 430 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZNF467Q7Z7K2 595 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 CCDC84Q86UT8 332 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 SKA1Q96BD8 255 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRDM10Q9NQV6 1147 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 RPAP1Q9BWH6 1393 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 HMGCRP04035 888 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 RXRAP19793 462 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PTGER2P43116 358 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 FLT3LGP49771 235 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARHGAP4P98171 946 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PTH1RQ03431 593 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 SEPT8Q92599 483 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA4Q13439 2230 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 SMCO2A6NFE2 343 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 CYP2C8P10632 490 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 AKR1A1P14550 325 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 KRT2P35908 639 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 THPOP40225 353 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 POLGP54098 1239 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 KRT85P78386 507 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 TRPC3Q13507 836 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 SPECC1Q5M775 1068 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 NCAPH2Q6IBW4 605 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 LLGL2Q6P1M3 1020 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 OTOP2Q7RTS6 562 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 TTC14Q96N46 770 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 ALS2CR12Q96Q35 445 aa6.3□□□□□ -1.4
CDC42BPA-209ENST00000448940 PFASO15067 1338 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 MCAMP43121 646 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 GABPAQ06546 454 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 NR1H3Q13133 447 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 PDXDC2PQ6P474 469 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZC3H14Q6PJT7 736 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 GLYCTKQ8IVS8 523 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 CMTR1Q8N1G2 835 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FAM167AQ96KS9 214 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 TCEANC2Q96MN5 208 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 PIH1D3Q9NQM4 214 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA8CPA6NN73 597 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 TADA2AO75478 443 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 CCL23P55773 120 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 CRY2Q49AN0 593 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 HDDC3Q8N4P3 179 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 NACC1Q96RE7 527 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 LIMCH1Q9UPQ0 1083 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 ABCB11O95342 1321 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 GH1P01241 217 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 AK2P54819 239 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 CDC37Q16543 378 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FILIP1LQ4L180 1135 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 XKR9Q5GH70 373 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 BTBD8Q5XKL5 378 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 DACH1Q9UI36 760 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FZD9O00144 591 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FGFR1OPO95684 399 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 LRG1P02750 347 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 KLRC2P26717 231 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 ANXA13P27216 316 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 ENOX2Q16206 610 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 SASS6Q6UVJ0 657 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 GSDMBQ8TAX9 411 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 POP1Q99575 1024 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 DSCC1Q9BVC3 393 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 EXOC7Q9UPT5 735 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FAM205AQ6ZU69 1335 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 DEXIO95424 95 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms