RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 LETM2Q2VYF4 491 aa15.25■□□□□ 0.03
POLR1B-209ENST00000448770 GLIS3Q8NEA6 775 aa15.25■□□□□ 0.03
POLR1B-209ENST00000448770 ANKS1AQ92625 1134 aa15.25■□□□□ 0.03
POLR1B-209ENST00000448770 PSMB7Q99436 277 aa15.25■□□□□ 0.03
POLR1B-209ENST00000448770 TMEM47Q9BQJ4 181 aa15.25■□□□□ 0.03
POLR1B-209ENST00000448770 NOC4LQ9BVI4 516 aaKnown RBP15.25■□□□□ 0.03
POLR1B-209ENST00000448770 EHD4Q9H223 541 aa15.25■□□□□ 0.03
POLR1B-209ENST00000448770 CWC15Q9P013 229 aaKnown RBP15.25■□□□□ 0.03
POLR1B-209ENST00000448770 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
POLR1B-209ENST00000448770 MOCS3O95396 460 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 TUBBP07437 444 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
POLR1B-209ENST00000448770 STIM1Q13586 685 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 ERGIC2Q96RQ1 377 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 RASSF4Q9H2L5 321 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 SLC39A2Q9NP94 309 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 JADE2Q9NQC1 790 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 SIK3Q9Y2K2 1263 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 EDIL3O43854 480 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 TECP42680 631 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 CAGE1Q8TC20 777 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 AFAP1L1Q8TED9 768 aa15.24■□□□□ 0.03
POLR1B-209ENST00000448770 AENQ8WTP8 325 aaKnown RBP15.24■□□□□ 0.03
POLR1B-209ENST00000448770 PCMTD1Q96MG8 357 aaPredicted RBP15.24■□□□□ 0.03
POLR1B-209ENST00000448770 SNED1Q8TER0 1413 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 NCK2O43639 380 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 CCNT1O60563 726 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 OR52Z1P0C646 297 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 CXCR5P32302 372 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 PRPHP41219 470 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 RPS8P62241 208 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 DDB1Q16531 1140 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 TSR1Q2NL82 804 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 NFRKBQ6P4R8 1299 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 CCDC170Q8IYT3 715 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 CCDC155Q8N6L0 562 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 SECISBP2LQ93073 1101 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 C7orf25Q9BPX7 421 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 LRRC1Q9BTT6 524 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 FAM207AQ9NSI2 230 aaPredicted RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 RSPH14Q9UHP6 348 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 SNX12Q9UMY4 172 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 ANO9A1A5B4 782 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 MYL1P05976 194 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 NOC3LQ8WTT2 800 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 SAP30BPQ9UHR5 308 aaKnown RBP15.23■□□□□ 0.03
POLR1B-209ENST00000448770 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 CCDC88AQ3V6T2 1871 aa15.23■□□□□ 0.03
POLR1B-209ENST00000448770 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 SBF2Q86WG5 1849 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 IVLP07476 585 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 RASA1P20936 1047 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 CKAP4Q07065 602 aaKnown RBP15.22■□□□□ 0.03
POLR1B-209ENST00000448770 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 GPR101Q96P66 508 aaPredicted RBP15.22■□□□□ 0.03
POLR1B-209ENST00000448770 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 ZNF652Q9Y2D9 606 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 MYMKA6NI61 221 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 EIF4A3P38919 411 aaKnown RBP15.22■□□□□ 0.03
POLR1B-209ENST00000448770 GRB10Q13322 594 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 CCDC96Q2M329 555 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 DZIP1Q86YF9 867 aaKnown RBP15.22■□□□□ 0.03
POLR1B-209ENST00000448770 ANKRD13CQ8N6S4 541 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 RETREG2Q8NC44 543 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 NUDT12Q9BQG2 462 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 NUP58Q9BVL2 599 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 PLAGL2Q9UPG8 496 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 PCDHA13Q9Y5I0 950 aa15.22■□□□□ 0.03
POLR1B-209ENST00000448770 MYH10P35580 1976 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 A0A1W2PQJ5 194 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 KIF11P52732 1056 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 CDK17Q00537 523 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 SKIDA1Q1XH10 827 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 FIGNQ5HY92 759 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 CENPPQ6IPU0 288 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 USP17L2Q6R6M4 530 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 PTF1AQ7RTS3 328 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 TMC4Q7Z404 712 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 TSEN2Q8NCE0 465 aaKnown RBP15.21■□□□□ 0.03
POLR1B-209ENST00000448770 EHBP1Q8NDI1 1231 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 TGFBRAP1Q8WUH2 860 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 TSPYL1Q9H0U9 437 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 ZNHIT6Q9NWK9 470 aaKnown RBP15.21■□□□□ 0.03
POLR1B-209ENST00000448770 SPATA31A1Q5TZJ5 1347 aa15.21■□□□□ 0.03
POLR1B-209ENST00000448770 DDX60LQ5H9U9 1706 aaKnown RBP15.21■□□□□ 0.03
POLR1B-209ENST00000448770 TSPY3P0CV98 308 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 TSPY8P0CW00 308 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 HNRNPH3P31942 346 aaKnown RBP15.21■□□□□ 0.02
POLR1B-209ENST00000448770 NAPAP54920 295 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms