RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SMPD1P17405 629 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 SNAP25P60880 206 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 ITGA7Q13683 1181 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 RASIP1Q5U651 963 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 PSRC1Q6PGN9 363 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 CXCL17Q6UXB2 119 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 NSMFQ6X4W1 530 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 C16orf59Q7L2K0 433 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 ZNF576Q9H609 170 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 ASTN1O14525 1302 aa16.1■□□□□ 0.17
PDLIM2-213ENST00000448520 BAATQ14032 418 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 ZNF365Q70YC5 407 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 TIFAQ96CG3 184 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 DSCC1Q9BVC3 393 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 IL23AQ9NPF7 189 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 PDGFCQ9NRA1 345 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 RBM8AQ9Y5S9 174 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 LAMA4Q16363 1823 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 ZMYM6O95789 1325 aa16.09■□□□□ 0.17
PDLIM2-213ENST00000448520 REC8O95072 547 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 SLC16A2P36021 539 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 NT5C2P49902 561 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 HAND2P61296 217 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 GRIN2CQ14957 1233 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 HERVK_113Q902F9 699 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 PPP1R12CQ9BZL4 782 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 HIPK3Q9H422 1215 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 TAF6LQ9Y6J9 622 aa16.08■□□□□ 0.16
PDLIM2-213ENST00000448520 FGBP02675 491 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 CYP2C18P33260 490 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 AKNAD1Q5T1N1 836 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 RPUSD2Q8IZ73 545 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 MAP4K1Q92918 833 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 POLR3EQ9NVU0 708 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
PDLIM2-213ENST00000448520 RBM47A0AV96 593 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 B4DLN1 442 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 SUPT20HL2P0C7V6 817 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 ACRP10323 421 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 PDHBP11177 359 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 ALDH5A1P51649 535 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 MRPL12P52815 198 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 BRDTQ58F21 947 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 SYMPKQ92797 1274 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 MAF1Q9H063 256 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 MSRAQ9UJ68 235 aa16.06■□□□□ 0.16
PDLIM2-213ENST00000448520 PRUNE2Q8WUY3 3088 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 FRMPD2Q68DX3 1309 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 PTPDC1A2A3K4 754 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 CPT1AP50416 773 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 RAB30Q15771 203 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 RNF207Q6ZRF8 634 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 DNERQ8NFT8 737 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 PBX4Q9BYU1 374 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 CDH23Q9H251 3354 aa16.05■□□□□ 0.16
PDLIM2-213ENST00000448520 NFIBO00712 420 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 SLC27A2O14975 620 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 B4GALT4O60513 344 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 KPNA6O60684 536 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 NECTIN1Q15223 517 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 ESR2Q92731 530 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 NOC4LQ9BVI4 516 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 DDX49Q9Y6V7 483 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-213ENST00000448520 GRXCR1A8MXD5 290 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 ZNF213O14771 459 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 CYP21A2P08686 494 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 CALML3P27482 149 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 PBX2P40425 430 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms