RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 LNPKQ9C0E8 428 aa23.9■■□□□ 1.42
UBE2F-217ENST00000448502 ZNF576Q9H609 170 aa23.9■■□□□ 1.42
UBE2F-217ENST00000448502 IL23AQ9NPF7 189 aa23.9■■□□□ 1.42
UBE2F-217ENST00000448502 CCDC171Q6TFL3 1326 aa23.89■■□□□ 1.42
UBE2F-217ENST00000448502 ZEB2O60315 1214 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 PSMC6P62333 389 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 DUSP28Q4G0W2 176 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 SLC30A10Q6XR72 485 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 TBC1D10CQ8IV04 446 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 CLEC4DQ8WXI8 215 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 TRPV6Q9H1D0 765 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 HIPK3Q9H422 1215 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 ADD3Q9UEY8 706 aaKnown RBP23.89■■□□□ 1.41
UBE2F-217ENST00000448502 GBF1Q92538 1859 aa23.89■■□□□ 1.41
UBE2F-217ENST00000448502 PTPDC1A2A3K4 754 aa23.88■■□□□ 1.41
UBE2F-217ENST00000448502 TRIM6-TRIM34B2RNG4 842 aa23.88■■□□□ 1.41
UBE2F-217ENST00000448502 B4GALT4O60513 344 aa23.88■■□□□ 1.41
UBE2F-217ENST00000448502 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
UBE2F-217ENST00000448502 AKNAD1Q5T1N1 836 aa23.88■■□□□ 1.41
UBE2F-217ENST00000448502 NOC4LQ9BVI4 516 aaKnown RBP23.88■■□□□ 1.41
UBE2F-217ENST00000448502 CXXC1Q9P0U4 656 aaPredicted RBP23.88■■□□□ 1.41
UBE2F-217ENST00000448502 SNHG28P0DPA3 235 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 ZNF543Q08ER8 600 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 USP38Q8NB14 1042 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 HERVK_113Q902F9 699 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 SEZ6LQ9BYH1 1024 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 WDR11Q9BZH6 1224 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 LAMA4Q16363 1823 aa23.87■■□□□ 1.41
UBE2F-217ENST00000448502 LOC102724159A0A0B4J2E5 919 aa23.86■■□□□ 1.41
UBE2F-217ENST00000448502 CCL23P55773 120 aa23.86■■□□□ 1.41
UBE2F-217ENST00000448502 PWP2Q15269 919 aaKnown RBP23.86■■□□□ 1.41
UBE2F-217ENST00000448502 MFSD6Q6ZSS7 791 aa23.86■■□□□ 1.41
UBE2F-217ENST00000448502 RILPL2Q969X0 211 aa23.86■■□□□ 1.41
UBE2F-217ENST00000448502 TTC14Q96N46 770 aa23.86■■□□□ 1.41
UBE2F-217ENST00000448502 WNT8AQ9H1J5 351 aa23.86■■□□□ 1.41
UBE2F-217ENST00000448502 NEDD4P46934 1319 aa23.85■■□□□ 1.41
UBE2F-217ENST00000448502 RBM47A0AV96 593 aaKnown RBP23.85■■□□□ 1.41
UBE2F-217ENST00000448502 PCP11498 1178 aaKnown RBP23.85■■□□□ 1.41
UBE2F-217ENST00000448502 CALML3P27482 149 aa23.85■■□□□ 1.41
UBE2F-217ENST00000448502 RNF207Q6ZRF8 634 aa23.85■■□□□ 1.41
UBE2F-217ENST00000448502 SMC5Q8IY18 1101 aa23.85■■□□□ 1.41
UBE2F-217ENST00000448502 SCN10AQ9Y5Y9 1956 aa23.85■■□□□ 1.41
UBE2F-217ENST00000448502 WDR19Q8NEZ3 1342 aa23.84■■□□□ 1.41
UBE2F-217ENST00000448502 FGBP02675 491 aa23.84■■□□□ 1.41
UBE2F-217ENST00000448502 SDSP20132 328 aa23.84■■□□□ 1.41
UBE2F-217ENST00000448502 RPS6P62753 249 aaKnown RBP23.84■■□□□ 1.41
UBE2F-217ENST00000448502 VWCEQ96DN2 955 aa23.84■■□□□ 1.41
UBE2F-217ENST00000448502 ALDH8A1Q9H2A2 487 aaPredicted RBP23.84■■□□□ 1.41
UBE2F-217ENST00000448502 EDNRBP24530 442 aa23.83■■□□□ 1.41
UBE2F-217ENST00000448502 PURAQ00577 322 aaKnown RBP23.83■■□□□ 1.41
UBE2F-217ENST00000448502 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
UBE2F-217ENST00000448502 ZKSCAN3Q9BRR0 538 aa23.83■■□□□ 1.41
UBE2F-217ENST00000448502 CPVLQ9H3G5 476 aa23.83■■□□□ 1.41
UBE2F-217ENST00000448502 PNMA2Q9UL42 364 aa23.83■■□□□ 1.41
UBE2F-217ENST00000448502 MUC3AQ02505 3323 aa23.82■■□□□ 1.4
UBE2F-217ENST00000448502 GOLGA8HP0CJ92 632 aa23.82■■□□□ 1.4
UBE2F-217ENST00000448502 OTOP2Q7RTS6 562 aa23.82■■□□□ 1.4
UBE2F-217ENST00000448502 RNF41Q9H4P4 317 aaPredicted RBP23.82■■□□□ 1.4
UBE2F-217ENST00000448502 PRDM12Q9H4Q4 367 aa23.82■■□□□ 1.4
UBE2F-217ENST00000448502 TRMT13Q9NUP7 481 aaKnown RBP23.82■■□□□ 1.4
UBE2F-217ENST00000448502 POLR3EQ9NVU0 708 aa23.82■■□□□ 1.4
UBE2F-217ENST00000448502 SCN5AQ14524 2016 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 MYL3P08590 195 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 CPT1AP50416 773 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 PDE4DQ08499 809 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 PLEKHM2Q8IWE5 1019 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 OR6J1Q8NGC5 347 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 ESR2Q92731 530 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 SCLYQ96I15 445 aa23.81■■□□□ 1.4
UBE2F-217ENST00000448502 IGHDP01880 384 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 CYP2C9P11712 490 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 MFAP1P55081 439 aaKnown RBP23.8■■□□□ 1.4
UBE2F-217ENST00000448502 RAB30Q15771 203 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 USH1GQ495M9 461 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 GPATCH4Q5T3I0 446 aaKnown RBP23.8■■□□□ 1.4
UBE2F-217ENST00000448502 DNERQ8NFT8 737 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 COPS5Q92905 334 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 UBA5Q9GZZ9 404 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 MTIF3Q9H2K0 278 aaKnown RBP23.8■■□□□ 1.4
UBE2F-217ENST00000448502 OSBPL3Q9H4L5 887 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 MSRAQ9UJ68 235 aa23.8■■□□□ 1.4
UBE2F-217ENST00000448502 YBX2Q9Y2T7 364 aaKnown RBP23.8■■□□□ 1.4
UBE2F-217ENST00000448502 REV3LO60673 3130 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 MYH6P13533 1939 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 ZNF213O14771 459 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 PPP2R5BQ15173 497 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 CHD1LQ86WJ1 897 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 DGKHQ86XP1 1220 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 SCFD2Q8WU76 684 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 GAS2L1Q99501 681 aaPredicted RBP23.79■■□□□ 1.4
UBE2F-217ENST00000448502 MTG1Q9BT17 334 aaPredicted RBP23.79■■□□□ 1.4
UBE2F-217ENST00000448502 NKX2-4Q9H2Z4 354 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 TNKSO95271 1327 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 TRANK1O15050 2925 aa23.79■■□□□ 1.4
UBE2F-217ENST00000448502 NKRFO15226 690 aaKnown RBP eCLIP23.78■■□□□ 1.4
UBE2F-217ENST00000448502 AAMPQ13685 434 aa23.78■■□□□ 1.4
UBE2F-217ENST00000448502 ADGRE1Q14246 886 aa23.78■■□□□ 1.4
UBE2F-217ENST00000448502 CWC27Q6UX04 472 aaKnown RBP23.78■■□□□ 1.4
UBE2F-217ENST00000448502 RPUSD2Q8IZ73 545 aaKnown RBP23.78■■□□□ 1.4
UBE2F-217ENST00000448502 PNMA1Q8ND90 353 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms