RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TEX9Q8N6V9 391 aa21.25■□□□□ 0.99
HMGA1-205ENST00000447654 STAMBPL1Q96FJ0 436 aa21.25■□□□□ 0.99
HMGA1-205ENST00000447654 TRIM10Q9UDY6 481 aa21.25■□□□□ 0.99
HMGA1-205ENST00000447654 HPS5Q9UPZ3 1129 aa21.25■□□□□ 0.99
HMGA1-205ENST00000447654 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
HMGA1-205ENST00000447654 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
HMGA1-205ENST00000447654 N4BP3O15049 544 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 PTPREP23469 700 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 KIAA0753Q2KHM9 967 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 CCDC155Q8N6L0 562 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 HELBQ8NG08 1087 aaPredicted RBP21.24■□□□□ 0.99
HMGA1-205ENST00000447654 WHAMMQ8TF30 809 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 L3MBTL3Q96JM7 780 aaPredicted RBP21.24■□□□□ 0.99
HMGA1-205ENST00000447654 ALS2CR12Q96Q35 445 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
HMGA1-205ENST00000447654 CNNM1Q9NRU3 951 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 CCDC87Q9NVE4 849 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 SERTAD1Q9UHV2 236 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 LEMD3Q9Y2U8 911 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 SPEF2Q9C093 1822 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 ENO4A6NNW6 628 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 PDE8AO60658 829 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 ALADP13716 330 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 GKAP1Q5VSY0 366 aaPredicted RBP21.24■□□□□ 0.99
HMGA1-205ENST00000447654 PUS7LQ9H0K6 701 aaKnown RBP21.24■□□□□ 0.99
HMGA1-205ENST00000447654 JADE2Q9NQC1 790 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 GDF3Q9NR23 364 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 BAIAP2L1Q9UHR4 511 aa21.24■□□□□ 0.99
HMGA1-205ENST00000447654 GOLGA6L10A6NI86 522 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 GOLGA8BA8MQT2 603 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 ACTN4O43707 911 aaKnown RBP21.23■□□□□ 0.99
HMGA1-205ENST00000447654 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 HAUS3Q68CZ6 603 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 EIF1ADQ8N9N8 165 aaKnown RBP21.23■□□□□ 0.99
HMGA1-205ENST00000447654 CCDC43Q96MW1 224 aaKnown RBP21.23■□□□□ 0.99
HMGA1-205ENST00000447654 PCDHGC5Q9Y5F6 944 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 POLR2DO15514 142 aaKnown RBP21.23■□□□□ 0.99
HMGA1-205ENST00000447654 PAPOLAP51003 745 aaKnown RBP21.23■□□□□ 0.99
HMGA1-205ENST00000447654 CCNG1P51959 295 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 BIRC3Q13489 604 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 CHST3Q7LGC8 479 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 GSDMAQ96QA5 445 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 CHP1Q99653 195 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 TMBIM4Q9HC24 238 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 ZBTB12Q9Y330 459 aaPredicted RBP21.23■□□□□ 0.99
HMGA1-205ENST00000447654 RPS6KL1Q9Y6S9 549 aa21.23■□□□□ 0.99
HMGA1-205ENST00000447654 IFIT3O14879 490 aaKnown RBP21.22■□□□□ 0.99
HMGA1-205ENST00000447654 CAMTA2O94983 1202 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 KCNQ4P56696 695 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 KRT31Q15323 416 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 MEA1Q16626 185 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
HMGA1-205ENST00000447654 CCDC181Q5TID7 509 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 KRT40Q6A162 431 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 HDAC7Q8WUI4 952 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 ALG1Q9BT22 464 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 RNF14Q9UBS8 474 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 SLC12A6Q9UHW9 1150 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 MYO5AQ9Y4I1 1855 aaKnown RBP21.22■□□□□ 0.99
HMGA1-205ENST00000447654 NWD2Q9ULI1 1742 aa21.22■□□□□ 0.99
HMGA1-205ENST00000447654 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 A0A1W2PQC6 194 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 COPB1P53618 953 aaKnown RBP21.21■□□□□ 0.99
HMGA1-205ENST00000447654 ZNF268Q14587 947 aaPredicted RBP21.21■□□□□ 0.99
HMGA1-205ENST00000447654 SEC31BQ9NQW1 1179 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 CHCHD3Q9NX63 227 aaKnown RBP21.21■□□□□ 0.99
HMGA1-205ENST00000447654 OPLAHO14841 1288 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 ZNF185O15231 689 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 PDE8BO95263 885 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 LMNB2Q03252 620 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 SPRED3Q2MJR0 410 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 HIBCHQ6NVY1 386 aaPredicted RBP21.21■□□□□ 0.99
HMGA1-205ENST00000447654 PTF1AQ7RTS3 328 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 SDCCAG8Q86SQ7 713 aaPredicted RBP21.21■□□□□ 0.99
HMGA1-205ENST00000447654 PIK3R5Q8WYR1 880 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 PPANQ9NQ55 473 aaKnown RBP21.21■□□□□ 0.99
HMGA1-205ENST00000447654 SLC5A4Q9NY91 659 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 RGL1Q9NZL6 768 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 SWAP70Q9UH65 585 aa21.21■□□□□ 0.99
HMGA1-205ENST00000447654 SETSIPP0DME0 302 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 CCND1P24385 295 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 PHKA1P46020 1223 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
HMGA1-205ENST00000447654 CDC37Q16543 378 aaPredicted RBP21.2■□□□□ 0.98
HMGA1-205ENST00000447654 C8orf74Q6P047 294 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 TBC1D31Q96DN5 1066 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 NDST4Q9H3R1 872 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 FBXO2Q9UK22 296 aaPredicted RBP21.2■□□□□ 0.98
HMGA1-205ENST00000447654 LUC7L2Q9Y383 392 aaKnown RBP21.2■□□□□ 0.98
HMGA1-205ENST00000447654 PSMD2Q13200 908 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 BYSLQ13895 437 aaKnown RBP21.2■□□□□ 0.98
HMGA1-205ENST00000447654 EZH2Q15910 746 aaKnown RBP21.2■□□□□ 0.98
HMGA1-205ENST00000447654 MTHFD1LQ6UB35 978 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 SMIM5Q71RC9 77 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 CCDC63Q8NA47 563 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 ZNF570Q96NI8 536 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 CAPN11Q9UMQ6 739 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 SLC12A4Q9UP95 1085 aa21.2■□□□□ 0.98
HMGA1-205ENST00000447654 RNF225M0QZC1 329 aaPredicted RBP21.19■□□□□ 0.98
HMGA1-205ENST00000447654 TACC1O75410 805 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms