RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 ALDH3A1P30838 453 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 SMC6Q96SB8 1091 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 IFIH1Q9BYX4 1025 aaKnown RBP19.6■□□□□ 0.73
ATG9A-215ENST00000446716 TRIM31Q9BZY9 425 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 PARP2Q9UGN5 583 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 UTP11Q9Y3A2 253 aaKnown RBP19.6■□□□□ 0.73
ATG9A-215ENST00000446716 ZHX2Q9Y6X8 837 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 CDHR2Q9BYE9 1310 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 LACTBP83111 547 aaPredicted RBP19.6■□□□□ 0.73
ATG9A-215ENST00000446716 BRIP1Q9BX63 1249 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 MIS12Q9H081 205 aa19.6■□□□□ 0.73
ATG9A-215ENST00000446716 CLUL1Q15846 466 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.59■□□□□ 0.73
ATG9A-215ENST00000446716 RIPOR2Q9Y4F9 1068 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 ABCB4P21439 1286 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 SCYL2Q6P3W7 929 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 KRT222Q8N1A0 295 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 AK8Q96MA6 479 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 NACC1Q96RE7 527 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 STRBPQ96SI9 672 aaKnown RBP19.59■□□□□ 0.73
ATG9A-215ENST00000446716 RPAP1Q9BWH6 1393 aaPredicted RBP19.59■□□□□ 0.73
ATG9A-215ENST00000446716 IFNAR1P17181 557 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 TBC1D31Q96DN5 1066 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 CUEDC2Q9H467 287 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 NT5C2P49902 561 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 DAAM2Q86T65 1068 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 MRRFQ96E11 262 aaKnown RBP19.59■□□□□ 0.73
ATG9A-215ENST00000446716 PSMB7Q99436 277 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 TRIM7Q9C029 511 aa19.59■□□□□ 0.73
ATG9A-215ENST00000446716 SH3BP5O60239 455 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 ZSCAN20P17040 1043 aaPredicted RBP19.58■□□□□ 0.73
ATG9A-215ENST00000446716 PPP2R3AQ06190 1150 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 DGKHQ86XP1 1220 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 MAP7D1Q3KQU3 841 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 NSUN7Q8NE18 718 aaKnown RBP19.58■□□□□ 0.73
ATG9A-215ENST00000446716 CCT6BQ92526 530 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 KMT5AQ9NQR1 393 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 NKIRAS1Q9NYS0 192 aa19.58■□□□□ 0.73
ATG9A-215ENST00000446716 PDE6CP51160 858 aa19.58■□□□□ 0.72
ATG9A-215ENST00000446716 OR8K1Q8NGG5 319 aa19.58■□□□□ 0.72
ATG9A-215ENST00000446716 PLEKHG2Q9H7P9 1386 aa19.58■□□□□ 0.72
ATG9A-215ENST00000446716 ALKQ9UM73 1620 aa19.58■□□□□ 0.72
ATG9A-215ENST00000446716 ZNF521Q96K83 1311 aa19.58■□□□□ 0.72
ATG9A-215ENST00000446716 RNASELQ05823 741 aaKnown RBP19.58■□□□□ 0.72
ATG9A-215ENST00000446716 SND1Q7KZF4 910 aaKnown RBP eCLIP19.58■□□□□ 0.723e-7■■□□□ 14.4
ATG9A-215ENST00000446716 XPO4Q9C0E2 1151 aaKnown RBP19.58■□□□□ 0.72
ATG9A-215ENST00000446716 PNMA6FA0A0J9YX94 578 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 CASC4Q6P4E1 433 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 CCDC105Q8IYK2 499 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.57■□□□□ 0.72
ATG9A-215ENST00000446716 CRCPO75575 148 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 EVCP57679 992 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 SLC39A14Q15043 492 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 TMED8Q6PL24 325 aaPredicted RBP19.57■□□□□ 0.72
ATG9A-215ENST00000446716 PPANQ9NQ55 473 aaKnown RBP19.57■□□□□ 0.72
ATG9A-215ENST00000446716 POLR2BP30876 1174 aaKnown RBP19.57■□□□□ 0.72
ATG9A-215ENST00000446716 PIK3CAP42336 1068 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 LIFRP42702 1097 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 PDXDC2PQ6P474 469 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 GSDMBQ8TAX9 411 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 GAP43P17677 238 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 PSMC4P43686 418 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 TUBB2AQ13885 445 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 CCDC6Q16204 474 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 UBE2SQ16763 222 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 APOBEC3FQ8IUX4 373 aaKnown RBP19.57■□□□□ 0.72
ATG9A-215ENST00000446716 TUBB2BQ9BVA1 445 aa19.57■□□□□ 0.72
ATG9A-215ENST00000446716 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 C1orf167Q5SNV9 1468 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 HOXA13P31271 388 aaPredicted RBP19.56■□□□□ 0.72
ATG9A-215ENST00000446716 ITIH3Q06033 890 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 MTERF2Q49AM1 385 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 DNAJC21Q5F1R6 531 aaKnown RBP19.56■□□□□ 0.72
ATG9A-215ENST00000446716 RNF207Q6ZRF8 634 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 TRIM50Q86XT4 487 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 MAIP1Q8WWC4 291 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
ATG9A-215ENST00000446716 NDUFA8P51970 172 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 ANKS4BQ8N8V4 417 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 CCDC89Q8N998 374 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 SMC1BQ8NDV3 1235 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 ZBTB9Q96C00 473 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 KRT81Q14533 505 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 HOXC10Q9NYD6 342 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 STAM2O75886 525 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 IVLP07476 585 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 HADHQ16836 314 aaKnown RBP19.56■□□□□ 0.72
ATG9A-215ENST00000446716 KLHL7Q8IXQ5 586 aa19.56■□□□□ 0.72
ATG9A-215ENST00000446716 PSAPP07602 524 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 CCDC51Q96ER9 411 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 ISCA1Q9BUE6 129 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG9A-215ENST00000446716 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 USP17L5A8MUK1 530 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 ATP5DP30049 168 aa19.55■□□□□ 0.72
ATG9A-215ENST00000446716 RC3H1Q5TC82 1133 aaKnown RBP19.55■□□□□ 0.72
ATG9A-215ENST00000446716 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms