RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ATRIPQ8WXE1 791 aa18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 ADD3Q9UEY8 706 aaKnown RBP18.89■□□□□ 0.61
LAPTM4B-201ENST00000445593 EDIL3O43854 480 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 STK4Q13043 487 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 CUL5Q93034 780 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 CALML4Q96GE6 196 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 RMND1Q9NWS8 449 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 ZNF215Q9UL58 517 aaPredicted RBP18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 F5H6K3 240 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 ECE1P42892 770 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 NT5C2P49902 561 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 CACNB1Q02641 598 aaPredicted RBP18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 KLRC3Q07444 240 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 CDKAL1Q5VV42 579 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 EXOC1Q9NV70 894 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 CGNQ9P2M7 1197 aaKnown RBP18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 MYH8P13535 1937 aa18.88■□□□□ 0.61
LAPTM4B-201ENST00000445593 NOVP48745 357 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 CCSER1Q9C0I3 900 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 DDX25Q9UHL0 483 aaKnown RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 KLRC4O43908 158 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 GPATCH4Q5T3I0 446 aaKnown RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 SLC30A10Q6XR72 485 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 SIAH1Q8IUQ4 282 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 TMEM139Q8IV31 216 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 LRRN4CLQ8ND94 238 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 MORC2Q9Y6X9 1032 aaPredicted RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 PLIN4Q96Q06 1357 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 AKR1B15C9JRZ8 316 aaPredicted RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 UBXN1Q04323 297 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 KCNK18Q7Z418 384 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 IRX2Q9BZI1 471 aaPredicted RBP18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 TRIM9Q9C026 710 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 LZTFL1Q9NQ48 299 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 RWDD2AQ9UIY3 292 aa18.87■□□□□ 0.61
LAPTM4B-201ENST00000445593 PSMD14O00487 310 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 TBX2Q13207 712 aaPredicted RBP18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 KBTBD4Q9NVX7 518 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 TBC1D7Q9P0N9 293 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 RGS17Q9UGC6 210 aaPredicted RBP18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 PPP2R2CQ9Y2T4 447 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 PAXBP1Q9Y5B6 917 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 NKRFO15226 690 aaKnown RBP eCLIP18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 NDUFB10O96000 172 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 STAT3P40763 770 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 COPB1P53618 953 aaKnown RBP18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 LRRC41Q15345 812 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 TMEM266Q2M3C6 531 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 RBM26Q5T8P6 1007 aaKnown RBP18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 CCDC17Q96LX7 622 aa18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
LAPTM4B-201ENST00000445593 RNF225M0QZC1 329 aaPredicted RBP18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 LAD1O00515 517 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 C7orf43Q8WVR3 580 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 RIC8AQ9NPQ8 531 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 PRPHP41219 470 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 GRB10Q13322 594 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 TCP11X2Q5H9J9 407 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 ADSSL1Q8N142 457 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 GLIS3Q8NEA6 775 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 PSMA7O14818 248 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 DPEP1P16444 411 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 FCHSD1Q86WN1 690 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 ACER1Q8TDN7 264 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 ZHX3Q9H4I2 956 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 SERPINA10Q9UK55 444 aa18.85■□□□□ 0.61
LAPTM4B-201ENST00000445593 SHTN1A0MZ66 631 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 ECM1Q16610 540 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 CSGALNACT2Q8N6G5 542 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 ANKRD20A12PQ8NF67 263 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 SECISBP2LQ93073 1101 aaKnown RBP18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 NRXN2Q9P2S2 1712 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 ESYT2A0FGR8 921 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 ARHGAP6O43182 974 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 MYO1BO43795 1136 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 GYPCP04921 128 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 UBXN2AP68543 259 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 STIM1Q13586 685 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 PNMA5Q96PV4 448 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 IDI2Q9BXS1 227 aa18.84■□□□□ 0.61
LAPTM4B-201ENST00000445593 MYMKA6NI61 221 aa18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 URI1O94763 535 aaPredicted RBP18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 SMARCA1P28370 1054 aa18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 GTF2F1P35269 517 aaKnown RBP eCLIP18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 NCBP1Q09161 790 aaKnown RBP18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 KRT79Q5XKE5 535 aa18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 PCMTD1Q96MG8 357 aaPredicted RBP18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 MTMR9Q96QG7 549 aa18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 TMEM39BQ9GZU3 492 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms